KEGG   Dryobates pubescens (Downy woodpecker): 104309024
Entry
104309024         CDS       T08526                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104309024 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpub03041]
    104309024 (SF3A1)
Spliceosome [BR:dpub03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104309024 (SF3A1)
 Complex B
    104309024 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    104309024 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 104309024
NCBI-ProteinID: XP_009908585
LinkDB
Position
Unknown
AA seq 786 aa
MQAVEADLCVRKNWLLWGLRRRRGRALCALCIAVCSACFSLSVQFGKAIGTARAEEESKE
EAAPAKPVVGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPTDPYH
AYYRHKVSEFKEGKAQEPSAAIPKVMQQQQSAQQQLPQKVQAQVIQETVVPKEPPPEFEF
IADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLV
EQYTKILIPPKGLLLKLKKEAENPKEVLDQVYYRVEWAKFQERERKKEEEEKEKERVAYA
QIDWHDFVVVETVDFQPNEQGNFPPPTTPEELGARILIQERYEKFGESEEVEMEVESDEE
DEKQEKTDEPPAQLDQDTQVQDMDEGSDDEDEGQKVPPPPETPMPPPLPPTPDQVIVRKD
YDPKASKPLPPAPAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSD
DEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEEKVTWDGHSGSMART
QQAAQANITLQEQIEAIHKAKGLVPEDDSKEKIGPSKPNEMPQPPPPSSASNPPASAQPI
TSVPRPPTQRNPPELAVKNGKQDLGGAFHSWRLGSAGLERKLGTFVPAPPVAPLPSPAPM
PPVHPPPPMEEEPVSKKLKSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLNGQVL
VFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMSSGSLIHLALKE
RGGRKK
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgcaggctgttgaagcagatctttgtgtcaggaagaactggctgctctgggggctgagg
aggaggagaggcagggccctgtgtgccctttgcattgctgtgtgcagtgcttgcttctcc
ctcagtgttcagtttggtaaggccattggcactgccagggctgaagaggagtcaaaagag
gaggcagccccagccaagcctgtggtgggaatcatttaccctcctccagaggtcaggaat
atcgtggacaagactgccagcttcgtggccagaaatggtcctgagtttgaggctcggatc
cgtcagaatgagatcaacaaccccaagttcaacttcctcaaccccaccgacccctaccac
gcctactaccgccacaaagtcagcgagttcaaggagggcaaagctcaggagccctcagct
gccatccccaaggtcatgcaacagcagcaaagtgctcagcagcagctgccacagaaggtg
caggcccaggtgatccaggagacagtggttcccaaagagccacctccagagttcgagttc
atcgctgaccctccctccatctcggccttcgacctggacgtggtgaagctgacggcgcag
ttcgtggcgcgcaacgggaggcagttcctgacccagctgatgcagaaggagcagaggaac
taccagttcgacttcctgcgcccccagcacagcctcttcaactacttcaccaagctggtt
gagcagtacacaaagatcttgatccctccaaagggtttgctcctcaagctcaagaaagag
gctgaaaatcccaaggaagtcctggaccaggtgtactacagggtggagtgggcgaagttc
caggagcgagagcggaagaaggaggaggaggagaaggagaaggagcgtgtggcctacgcc
cagatcgactggcacgacttcgtggtggtggagactgttgacttccagcccaatgagcaa
gggaatttcccccctcccaccaccccagaagagctgggagctcgcatcctgatccaggag
cgctacgagaagtttggggagagtgaggaggtggaaatggaggtggagtcagatgaggaa
gatgagaagcaagagaaaacagatgagcccccagcccagctggatcaagacactcaagtg
caggatatggatgagggctcggatgacgaagacgaaggtcagaaggttcctcctcctcca
gaaaccccaatgccaccacctcttcctcccaccccagaccaggtcattgtgaggaaagac
tacgatcccaaagcctccaagccgctgccaccagccccagccccagatgagtatctggtg
tcccccatcactggggagaagatccctgccagcaagatgcaggagcacatgaggatcggg
ctgctggacccgcgctggctggagcagcgcgaccgctccatccgcgagaagcagagcgac
gacgaagtctacgccccagggctggacattgagagcagcctgaagcagctggcagagcgc
cgtactgacatcttcggtgtggaggagactgccattggcaaaaagattggagaggaggag
atccagaagccagaggagaaggtgacctgggatggccactcgggcagcatggcccgcacg
cagcaggctgctcaggccaatattactctgcaagagcaaattgaagccatccacaaggcc
aagggactggtgccagaagatgacagcaaggagaagattggtcccagcaaacccaatgaa
atgccacagccaccccctccttcatcagcatcaaatcccccagccagtgctcagcccatc
acgtccgttcctcgtcctcccacacagaggaaccctcctgaacttgcagttaaaaatgga
aagcaggacttgggtggagcttttcattcttggaggcttggatcagctgggctggagagg
aagctgggcaccttcgttcctgcccctcctgtggctcccctgccctctccggcccccatg
ccgcccgttcaccccccgccccccatggaggaggagccagtctccaagaagctgaagagt
gaggacagcctgatcccagaggaggagttcctgcgcaggaacaagggtccagtcacggtc
aaagtccaggttcccaacatgcaggacaagacagaatggaagctgaatggccaagtgttg
gtgttcactctgcctctctcagaccaggtgtctgttataaaggttaagatccacgaggcc
acaggcatgccagctgggaagcagaagctgcagtatgagggcatcttcatcaaggactca
aactccctggcatattacaacatgtcaagtggctctctgatccacctggcactcaaggaa
agaggaggcaggaagaaataa

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