Dryobates pubescens (Downy woodpecker): 104309073
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Entry
104309073 CDS
T08526
Symbol
USP48
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 48
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpub01002
]
104309073 (USP48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104309073 (USP48)
Enzymes [BR:
dpub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104309073 (USP48)
Peptidases and inhibitors [BR:
dpub01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104309073 (USP48)
Ubiquitin system [BR:
dpub04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104309073 (USP48)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
104309073
NCBI-ProteinID:
XP_009908644
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MWFLNLELRQALYLCPSECAAGEGIPKDKDYEPQTICEHLQYLFALLQNSKRRYIDPSGF
VKALGLDTGQQQDAQEFSKLFMSLLEDTLSKQKNPDVRNIVQKQFCGEYAYVTVCNQCGR
ESKLLSKFYELELNIQGHKQLTDCITEFLKEEKLEGDNRYFCESCQSKQNATRKIRLLSL
PCTLNLQLMRFVFDRQTGHKKKLNTYIGFSELLDMEPFMEQKNGLYVYELSAVLIHRGVS
AYSGHYIAHVKDPQTGEWYKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQARKPKCGKGSH
CSRNAYMLVYRLQTREKSLTVEVPAFLQELVERDNCKFEEWCNEMAEMRKQSVARGKIKH
EEVKELYKRLPAEAGSPYDFISLEMLQKWLDESTPPKPIDNTACLCSHGKLHPDKISIMK
RISEYVADFFYRRYGGGPRLNVKALCKECVVERCRILRLKNQLNEDYKAVTNLLKVTVKG
SDGFWVGKASLRSWRQLALEQLNEQDEDTEHSNGKVNGNTPSKDESNEEKREEEEELNFN
EDIVCPHGDLCISENERRVVSKEAWEKLKQYFPKAPEFPSSRECCSQCKILEREGEENEA
LHKMMASEQKTSLQNLFHDKSRPCLGSWPQETDELYIVSQFFVEEWRKFVRRPTRCSPVS
SVGNSVLLCPHGGLMFTYASMTKEDSKLIALIWPSEWERIQKLFVVDHVIKISRRPAAGA
EPDGAVFTSEPQLCPECREGLLCQQQRDLREYTQATIYIHKVVDNKKVMKDAAPELNVSS
SEAEEEREENKPEGEQDPDFNQANGSAKRQKVSHQSYASYQKQGIRRSTRHRKVRGEKAL
LVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDTATLXXXXXPESVNLLKADEPI
ADYAAMDDVMQVCMPEEGFKGTGLLGH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttctgaacctggagctgcgacaagctctctacttgtgccccagcgagtgtgca
gctggggagggcatccccaaagacaaagactatgagccccagacaatctgtgagcacctg
cagtacctgtttgccctgctgcagaacagcaagaggaggtacatcgacccctcaggcttc
gtcaaagctctgggcctggacacagggcagcagcaggatgcccaggagttctccaagctc
ttcatgtccttgctggaggatactttgtccaaacagaagaaccctgacgttcggaacatc
gtgcagaagcagttctgcggggagtatgcctatgtcaccgtttgcaaccagtgtggcagg
gagtccaagctcttatctaagttctacgagctggagttaaacatccaagggcacaagcag
ctgacagactgcatcacggaattcctgaaggaagaaaagctggaaggggacaaccgttac
ttctgtgagagctgccagagcaagcagaacgccaccaggaagatccggctgctcagcctg
ccctgcaccctcaacctgcagctcatgcgcttcgtctttgacaggcaaacgggccacaag
aagaagctgaacacctacattggcttctctgagctgctggacatggagcctttcatggaa
cagaagaacgggctctacgtctacgagctgagcgctgtcctcatccaccgcggcgtcagc
gcctactccggccactacatcgcccacgtcaaggacccccagacgggcgagtggtacaag
ttcaacgacgaggacatagagaagatggagggcaagaagctgcagctggggattgaggag
gatctagcagaaccttccaagtcccaggctcggaagcccaagtgcgggaagggcagccac
tgctcccgcaacgcctacatgctggtgtacaggctgcagaccagggagaagtccctcaca
gtcgaggtcccagctttcctgcaggagctggtggagagagacaactgcaagttcgaggag
tggtgcaacgagatggccgagatgcgcaagcagagcgtggccagaggcaagatcaagcac
gaggaggtgaaggagctctacaaaaggttacctgctgaagctggctccccctacgacttc
atctccctggagatgctgcagaagtggctggatgagtccactccccccaaacccatcgac
aacacagcctgcctgtgctcccacgggaagctgcacccagacaagatctccatcatgaag
aggatctctgagtacgtggcagacttcttctaccgcagatacggaggagggccccggctg
aacgtcaaagcactttgcaaggagtgtgtggtggagaggtgtcgaatcctgcgcctgaaa
aaccaactgaacgaggactacaaagctgtcaccaacctgctgaaggtgacagtcaagggg
agtgatggcttctgggttgggaaggcctccctgaggagctggcgccagctggctctggag
cagctaaatgagcaggacgaggacacagagcacagcaacggcaaagtgaatggcaacacc
ccaagcaaagatgaatccaatgaagagaagagagaggaggaggaggagttaaattttaat
gaagacatcgtgtgcccacatggtgacctctgcatctccgagaacgagcgcagggtggtt
tccaaggaagcctgggagaagctcaagcaatatttccccaaggccccagaattcccaagc
agcagagagtgctgctcccagtgcaagattttggagcgtgaaggggaggagaatgaagct
ctgcacaagatgatggccagtgagcaaaagacctctctccagaacctgttccacgacaaa
tccaggccttgtctgggcagctggcctcaggagacagatgagctgtacattgtctcacag
ttcttcgtggaagagtggaggaaattcgtcaggaggccgacgcgctgcagccctgtgtcc
tcggtggggaacagcgtcctgctctgcccccacgggggcctgatgttcacctacgcttcc
atgaccaaagaagactccaaacttatagctctgatatggcccagtgagtgggagaggatt
cagaaactctttgtggtggatcacgtcatcaagatcagccgcaggccggcggccggggcc
gagcccgacggcgcggtgttcacctctgagccccagctctgtccagagtgcagagaggga
ctcctgtgccagcagcagcgagacctgcgtgagtacacccaggccaccatctacatccac
aaagtggtggacaacaagaaggtgatgaaggacgctgctccggagctgaacgtgagcagc
tcagaagcggaagaggaaagggaggagaacaagccagagggggagcaggacccagatttt
aaccaggccaatggcagtgccaagcgccagaaggtctcccaccagagctatgccagctac
cagaagcagggcatcaggaggagcactcggcacaggaaggtgcgaggggagaaggctctg
ctggtgtctgcaaaccagaccctgaaggagctgaaaatacagatcatgcatgcattttca
gttgctcccttcgaccagaacctctccatcgacggcaagatcctgagcgacgacaccgcc
acgctnnnnnnnnnnnnnnnccccgagtctgtcaacctgctgaaggctgatgagcccatc
gcagactacgcagccatggacgatgtgatgcaagtttgtatgcctgaagaaggatttaaa
gggactggtttgcttggacactga
DBGET
integrated database retrieval system
