Dryobates pubescens (Downy woodpecker): 104309266
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Entry
104309266 CDS
T08526
Symbol
CACNA1S
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04010
MAPK signaling pathway
dpub04020
Calcium signaling pathway
dpub04260
Cardiac muscle contraction
dpub04261
Adrenergic signaling in cardiomyocytes
dpub04270
Vascular smooth muscle contraction
dpub04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104309266 (CACNA1S)
04020 Calcium signaling pathway
104309266 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
104309266 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
104309266 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
104309266 (CACNA1S)
04270 Vascular smooth muscle contraction
104309266 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dpub04040
]
104309266 (CACNA1S)
Ion channels [BR:
dpub04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104309266 (CACNA1S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
DUF2670
Motif
Other DBs
NCBI-GeneID:
104309266
NCBI-ProteinID:
XP_009908871
LinkDB
All DBs
Position
Unknown
AA seq
1844 aa
AA seq
DB search
MEPASPQDDVRRRQQKEKSKKPVPPAAPRPARALFCLTLQNPLRKACISIVEWKPFEIII
LLTIFANCVALAIYLPMPEDDTNIANSSLEKIEYAFLIFFAIEAMLKIIAYGFLFHTDAY
LRNGWNVLDFSIVSLGLVTMTLEQVNAKQSGTPGGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGKMHKTCYYLGTDVIATVASE
KPAPCTSSGHGRHCTINGTECRSGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAIGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLKGYMDWITHAEVMDSDRARGEGMMPLDEGGSETESLYEIEGMNKWILYFRQWRRWNR
MFRRKCRDVVKSKFFYWLVILMVALNTLSIASEHHFQPEWLTVIQDNANRVLLALFVAEM
LLKMYALGLRQYFLSLFNRFDCFVVCSGILETILVELGTLSPLGISVLRCIRLLRIFKIT
RYWTSLSNLVASLLNSVRSIASLLLLLFLFIIVFALLGMQLFGGKFDFEDMEVRRSTFDN
FPQALISVFQILTGEDWNAIMYDGIMAYGGPSFPGMLVCIYFIILFVCGNYILLNVFLAI
AVDNLAEAESLTLAQKAKAEERKRRKMSRGYPEKSEDEKQMLAKKLEQKVKGEGIPTTAK
LKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASSF
FIFSPTNKFRMLCHRIINATWFTNFILLFILLSSISLAAEDPIRAESFRNQVLRYFDIGF
TSVFTVEIVLKMTAYGAFLHKGSFCRNSFNILDLLVVAVSLTSMGTESSTISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVVVTTLLQFMFACIGVQLFKGKFYRCTD
PSKMTEKECRGYFINYVDGDPTQIELQKRVWYHSNFHFNNVFSAMMSLFTVSTFEGWPEL
LYMAIDTNAEDAGPIYNYRVEIAMFFIIYIILIAFFMMNIFVGFVIVTFQEQGESEYKNC
ELDKNQRQCVQYALKARPLRRYIPKNPYQYHIWYVVTSSYFEYLMFFLILLNTICLGMQH
YNQSEEMNHISDILNVAFTVLFTLEMILKLMAFKVKGYFGDPWNVFDFLIVIGSIIDVIL
SEIDTVLASRGGLYCLGGGCDGLDSDDNSRVSITFFRLFRVMRLVKLLSRGEGVRTLLWT
FIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIAMVDGTEINRNNNFQTFPQAVLLLFRC
ATGEDWQEILLGCSYGKLCDPESDFAEGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAV
IMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFC
PHRVACKRLVCMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRAVIKKIWK
RTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKRQEEYYGYRPKKNPVEIQAGL
RSIEEEAAPEIHRAISGDLTAEEELERAMVEAAMEEGIYRRTGGLFGQVDSFLEPGSPLQ
PQVASQRPLQFTEVGSEDFDSPVFLDDFPPEGNTNVNNANSRGWPEGMEYEDEVMRKTVP
AACRHPPQEHSHPLPMDRLPARPGRRRRARGHPTPGPQLPSQELPGVDGTVMGTASSSGH
QQGESGDLSTSSAPAITFLIQEALISGGLAVLARDPSFVTVTREEMAASSQLEVHEMERA
ALELLKGRGTLQDTKTGSALXDTXGSSPGLSAAPCQKTTTATHL
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgcttctccccaggatgacgtgaggaggaggcaacagaaggagaagtccaag
aagccggtgccaccagcagccccccggccagccagggctctgttctgtttaacccttcag
aacccactgcggaaggcttgcatcagcatcgtggagtggaaaccctttgagatcatcatc
ctcctgaccatctttgccaactgtgttgcactggccatctacctgccaatgcctgaggat
gacaccaacatcgccaactccagcctggagaagatcgagtatgccttcctcatcttcttt
gccatcgaggccatgctgaagatcattgcctatgggttcctgttccacacggatgcctac
ctgcggaacggctggaacgtgttggacttctccatcgtgtccctggggcttgtcaccatg
actctggaacaggtcaacgccaagcagagtgggacgccggggggcaagggcggctttgac
gtgaaggctctgcgagcgttccgtgtgctgagacctctgcgcctggtgtctggagtgcca
agccttcaggtcgtcctgaactccatcatcaaggccatggtgcccctgctccacattgcc
ctgttggtcctcttcatgatcatcatctatgccattgttgggcaagagctcttcaagggc
aagatgcacaagacctgctactacctcgggacagatgtgattgccacagtggcatcagag
aagcctgccccatgcaccagctctggacacgggcgacactgcaccatcaatggcactgag
tgccgaagtggctggccaggacccaacaatggcatcactcactttgacaactttggcttt
gccatgctgactgtctaccagtgcatcaccatggagggctggacagaagttctctactgg
gtaaatgatgccattgggaatgaatggccctggatctactttgtcagccttatcttgctt
ggctccttcttcgttctcaacctggtgctgggggtgctcagtggggagttcaccaaagag
cgtgagaaggccaagtcccgaggcacgtttcagaagctgagggagaagcagcagctggag
gaggatctgaagggctacatggattggatcactcatgctgaagtcatggacagtgatcgg
gccaggggtgaaggtatgatgccattggatgaaggagggtcagagacagagagcttgtat
gaaattgagggcatgaacaagtggattctctacttccggcagtggaggcgctggaaccga
atgttccgtaggaagtgcagggacgtggtgaagtccaagttcttctactggcttgtgatc
ctgatggtggcactgaacaccctctccatcgcctctgagcaccacttccagccagagtgg
ctgacagtgattcaagacaatgccaaccgggtgctgctggcactctttgtggccgagatg
ctgctgaagatgtatgccctggggctgcgccagtacttcctgtccctcttcaatcgcttc
gactgcttcgtggtgtgctcagggatcctggagaccatcctggtggagcttggcaccttg
tcacccctgggcatctccgtgctgcgctgcatccggctcctccgcatcttcaagatcacc
aggtactggacatcactgagcaacctggtggcctccctgctcaactctgttcgctccatt
gcctctctgctccttctcctcttcctcttcatcattgtctttgcattgctgggcatgcag
ctctttgggggcaagtttgactttgaggacatggaggtgcggcgcagcacatttgacaac
ttcccccaggccctcatcagtgtcttccagattctgactggagaagactggaatgcaatc
atgtatgatgggatcatggcctatgggggcccttccttccctggcatgctggtttgcatc
tacttcatcatcctcttcgtttgtgggaactatatcctcctcaacgtcttcctggccatc
gcagtcgataacctggcagaggctgagagcctgaccctggcccaaaaggccaaagcagag
gaacgcaagcgccggaagatgtccagaggttacccagagaagtctgaggatgagaagcag
atgctggcaaagaagcttgagcagaaagtgaagggagaagggattcctacaacagccaag
ttaaaagtggatgaatttgagtccaatgtcaatgagatcaaagacccctacccttctgca
gacttcccaggtgatgatgaggaggatgagcctgaaatccccctgagtcctcggccacgg
cccctggcagagctgcagctgaaagagaaggctgtgcccatgcctgaagccagctctttc
ttcatcttcagcccaaccaacaagtttcggatgctgtgccacagaatcatcaatgccacc
tggttcaccaacttcatcctgctcttcatcctgctcagcagcatctcgctggcagctgag
gatcccatccgggccgagtccttccgcaaccaggttctcagatactttgacattggtttc
acctctgtcttcactgttgagattgtcctgaagatgacagcctatggagctttcctgcat
aaaggctccttctgcaggaactccttcaacatcctggacttgctggtggtcgctgtctca
ctcacttccatgggcactgagtccagcaccatctcagtggtgaagatcctccgggtcctg
agggtgctgaggccgctgcgagccattaacagggcaaaagggctgaagcacgtggtccag
tgtgtgtttgtggccatcaagaccatcgggaacatcgtggttgtcacaaccttgctgcag
ttcatgtttgcctgcattggcgttcagctcttcaagggcaagttctacaggtgcacagac
ccatccaagatgacagagaaggagtgcaggggttacttcatcaactacgtggatggggac
cctacgcagatcgagctgcagaagcgcgtctggtaccacagcaacttccacttcaacaac
gtcttctcagccatgatgtcacttttcactgtctccacctttgagggctggccagagctg
ctctacatggccattgacaccaatgctgaagatgcaggccccatctacaactaccgggtg
gagattgcaatgttcttcatcatctacatcatcctcattgccttcttcatgatgaatatc
tttgtgggctttgtcattgtcaccttccaggagcaaggggagagcgagtacaagaactgt
gagctggacaagaaccagcggcagtgtgtgcagtacgcgctgaaggctcggcccctgcgc
cgctacatccccaagaacccctaccagtaccacatctggtatgtggtcacctcctcctac
ttcgagtacctcatgttcttcctgatcctgctcaacaccatctgcctgggcatgcagcat
tacaaccagtctgaagagatgaaccacatctcagacatcctcaatgtagccttcactgtt
ctcttcaccctggagatgatcctcaagctcatggcctttaaagtgaagggctacttcggg
gacccctggaatgtctttgacttcctcatagtgattggcagcatcattgatgtcatcctc
agtgagatcgatacagttcttgcatctcgtggtggactgtactgcctcggtgggggctgt
gatggccttgactcagatgacaactccagagtctccatcaccttcttccgtctcttccgg
gtgatgcggctggtgaagctgctgagccggggggaaggggtcaggaccctcctgtggacc
ttcatcaagtccttccaggcattgccctacgtagccctgctgattgtgatgctttttttc
atctatgctgtgattgggatgcagatgttcgggaagatcgccatggtggatgggacagag
atcaaccgcaacaacaacttccagaccttcccccaggctgtgctgctgctcttcaggtgt
gccactggtgaggactggcaggagattctcctgggctgcagctatggcaaactctgtgac
cctgagtctgacttcgccgagggtgaggagtacacctgtggcaccggcttcgcctacttc
tacttcatcagcttctacatgctctgtgccttcctgatcattaacctctttgtggctgtc
atcatggacaattttgactacctgacacgggactggtccatccttgggccccatcatctg
gatgagttcaaacggatctgggctgagtatgaccctgaggccaagggcagaatcaagcac
ttggatgtggtgaccctgctgagacgcattcagcccccactgggcttcgggaagttctgc
ccacaccgcgtggcctgtaagcgcctggtgtgcatgaacatgcccctgaacagtgatggc
actgtcaccttcaacgccaccctcttcgcgctggtgcggacagccctcaagatcaagaca
gaaggtaactttgagcaggccaacgaggagctcagagctgtgatcaagaaaatctggaag
cgaaccagtatgaagctcctggaccaggtcatcccccccattggagatgatgaggtgaca
gtggggaaattctatgcaactttcctcatccaagagcacttcaggaagttcatgaagcgc
caggaggagtattatgggtacaggcccaagaagaaccctgtggagatccaggctgggctg
aggagcattgaagaagaagctgctcctgagatccatcgagccatttctggggacctgact
gctgaggaggagctggaaagagcaatggtagaggcagccatggaggaagggatatatagg
aggacaggtggcttgtttggccaggtggacagcttcctggagcctggcagccccttgcag
ccccaggtggccagccagagacccctgcagttcacagaggtgggcagtgaggacttcgac
tctcctgtcttcctcgatgacttccccccggaaggcaacaccaacgtcaacaatgccaac
agcagaggctggccggaggggatggaatatgaagatgaggtgatgaggaagacagtgcca
gcagcatgcaggcatccaccacaggagcacagccaccctctacccatggacaggctgcca
gcaaggccaggcaggaggcgaagggcaagggggcacccaacaccagggccacagcttcca
tcccaggagctgcctggagtggatggcactgtgatgggaacagcatccagctcagggcac
cagcaaggcgaaagtggcgacctgagcacatcctccgccccagccatcaccttcctcatt
caggaggctctgatctccggaggccttgcggtcctggcccgcgacccatcctttgtcacg
gtgaccagggaggagatggcagccagcagccagctggaagtgcatgagatggagagagca
gccctggagctgctgaagggaagaggaacactgcaggatacaaaaactggctctgccctc
taggacaccntcggcagctccccagggctgagtgcagccccctgccagaaaaccaccact
gccactcacctgtga
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integrated database retrieval system
