Dryobates pubescens (Downy woodpecker): 104309276
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Entry
104309276 CDS
T08526
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104309276 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104309276 (HSPD1)
03110 Chaperones and folding catalysts [BR:
dpub03110
]
104309276 (HSPD1)
03029 Mitochondrial biogenesis [BR:
dpub03029
]
104309276 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpub04147
]
104309276 (HSPD1)
Enzymes [BR:
dpub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104309276 (HSPD1)
Messenger RNA biogenesis [BR:
dpub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104309276 (HSPD1)
Chaperones and folding catalysts [BR:
dpub03110
]
Heat shock proteins
HSP60 / Chaperonin
104309276 (HSPD1)
Mitochondrial biogenesis [BR:
dpub03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104309276 (HSPD1)
Exosome [BR:
dpub04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104309276 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
104309276 (HSPD1)
Exosomal proteins of breast cancer cells
104309276 (HSPD1)
Exosomal proteins of colorectal cancer cells
104309276 (HSPD1)
Exosomal proteins of bladder cancer cells
104309276 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
104309276
NCBI-ProteinID:
XP_009908885
UniProt:
A0A093FYL4
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MLRLPTVLRQIRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGARLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFEKISKGANPVEIRRGVMLAVDAIIAELKKLSKPVTTPEEIAQVATISANGDQ
EIGNIISDAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTTKGQKCEFQ
DAYVLISEKKISSVQSIVPALEIANSHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLSLNVEDIQPHDFGKVGEVIVTKDDTMLLKG
KGEKAQIEKRIQEIIEQLEVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDALAPANEDQRIGIEIIKRTLKIPAMTIA
KNAGVEGSLIVEKILQSPSEIGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEVPKEEKEPAMGGMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtttacctacggtactccgccagataaggccagtgtccagagcactcgccccc
catctaacacgagcgtatgcaaaagatgttaagtttggagcagatgcgagagctctcatg
cttcaaggagtagatcttctagcagatgctgtagctgtcaccatggggccaaagggaaga
acagttattattgaacaaagctggggaagtcccaaagtgacaaaagacggtgtgacagta
gcaaaggcgattgacttgaaagacaaatacaaaaatattggagccaggttagttcaagat
gttgccaacaatacaaacgaggaagcaggagatggtaccactactgccactgtccttgca
cgtgcgattgccaaggagggctttgagaagatcagcaaaggagctaacccagtagaaatc
aggaggggggtgatgcttgcagttgatgctatcatagctgagctgaagaagctgtccaaa
cctgtcacaactccagaagaaattgctcaggttgccacaatatcagcaaatggagatcag
gaaattggcaacatcatctctgatgcaatgaagaaagttgggcggaagggagtgatcact
gtcaaggatggaaaaaccctacatgatgaactggaaatcattgagggtatgaaatttgac
agaggctacatctctccgtatttcattaacacaaccaaagggcagaaatgcgaattccag
gatgcctatgtattaatcagtgagaagaagatctccagtgtacagtccatagttccagct
cttgaaattgccaattctcatcgcaaacctctggtcatcattgctgaagatgttgatgga
gaagccctcagcactctggtcttgaacagattgaaagttggtctccaggtggttgctgta
aaagcaccaggttttggtgacaacaggaaaaaccagctgaaggatatggcaattgctact
ggtggtgctgtgtttggagaagagggtttgagcctaaacgtggaagatattcagccccac
gactttggtaaagttggagaggtcattgtgacaaaagatgacaccatgctgctgaagggg
aagggtgaaaaagctcagatcgagaaacgcattcaggagatcattgaacagctggaagtt
accacaagtgaatacgagaaggagaaactgaacgaacgactggccaagctgtctgacgga
gtagcagtgctgaaggttggtggcacaagcgatgttgaagtgaatgagaagaaggacaga
gtcaccgatgccctgaacgccacccgtgctgctgtggaggagggcatcgttccgggcggt
ggctgtgccctgctgcgctgcattccggcgcttgatgccttggcaccagccaatgaagat
cagagaattggcattgaaataatcaagagaacactgaagatcccagccatgactattgcc
aagaacgcaggggtggaaggatcactaatagtggaaaaaatcctgcagagcccatcggaa
attggctatgatgccatgcttggggactttgtaaatatggtagaaaaaggaatcatagac
ccaacaaaggtggtgagaactgctctgatggatgctgcaggtgttgcttctctcctatcc
acagcagaagcagtggtgactgaagttcctaaagaagaaaaagaaccagcaatgggaggc
atgggagggatgggcggagggatgggaggtggcatgttctaa
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