Dryobates pubescens (Downy woodpecker): 104309616
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Entry
104309616 CDS
T08526
Symbol
SEC24A
Name
(RefSeq) protein transport protein Sec24A
KO
K14007
protein transport protein SEC24
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104309616 (SEC24A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104309616 (SEC24A)
Membrane trafficking [BR:
dpub04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104309616 (SEC24A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
104309616
NCBI-ProteinID:
XP_009909250
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MQMQGPVPSQLMHSPDAQAHRPPAPDPYLHQAPAKGPPHQPSGQYNYGGPQSVSQLNHFQ
GPGQTLNRPPVAPFSGSPAQQTGPAPAVLLPPLQSTAAAPSAGSFAPAAPSPWQHGQATA
LGAQASHVAHGTGAGSAQHAPSLAGAAKPAGSYPYAAPPGGPSLQKPFVQPGAAPPPVTQ
PLTPLHPPSRPPLGPPPLGGPPLTRPPAQAAGAASTQPLLNAAASQEGDAPAGDGAALHN
SYDAIEGGGLMASPHASPAPSKLNRAVGYSYPALRPGYQNAAGPGAPGTQYPEGAKHFPQ
PVLGTNHLTASLGGLSLQQEGLRSVNLLQERNILPTTLLKAPVPNLHEEIQRLNCNPELF
RCTLTNIPQTQALLNKAKLPLGLLLHPFKDLSQLPVVTSSTIVRCRSCRTYINPFVSFLD
QRRWKCNLCYRVNDVPEDFMYNPVTRVHGEPHKRPEVQNATIEFMAPSEYMLRPPQPPVY
LFVFDVSHNAVETGYLSTACQTLLDSLDSLPGNTRTKIGFITFDSTIHFYSLQEGLSQPQ
MLIVSDIEDVFVPMPENLLVNLNENKELIQDLLKTLPQMFTKSLETQSALGPALQAAFKL
MSPTGGRISVFQTQLPSVGMGALKPREEPNQRSSAKDIHLTPSTDFYKKLALDCSGQQVA
VDLFLLSGQYSDLASLGCISRYSAGSVYYYQSYHHKHNPVQVEKLQKELKRYLTRKIGFE
AVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMAVEESLTDMQVVSFQSA
LLYTSSKGERRIRVHTMCLPVVTTLSDVYLGADVQAITGLLANMAVDRSVSASLSDARDA
LVNAVIDSLAAYRGAVLSLQQPGLMAPHSLRLFPLYVLALLKQKAFQTGTSARLDDRIFA
MCQVKNQPLVYLMLMTHPSLYRVDTLTDEGALNINDRTIPQPPLLQLSVEKLSRDGAYLM
DAGSVMFLWIGKNCGQSFISQVLGVPNYGSIPQNMTQLPELDTAESIRTTTFIAWLREQR
PFFPILYVVKDESPLKSSFLQNMIEDRTESALSYYEFLLHIQQQVNK
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgcagggtcctgtcccaagccagctgatgcattccccagatgcccaggctcat
aggcctccagctccagacccctacttgcaccaggcgccggcgaagggccctccccatcag
ccttctggacagtacaactatggtggccctcagagcgtttctcagttaaaccacttccaa
ggacctgggcagactctcaacaggcccccagtggcacctttctctgggtcaccagcccaa
cagacaggccctgctccagcggtgctgctgcctcccttgcagagcacagctgccgccccc
tctgccggcagcttcgcccccgcggcgccctcgccctggcagcacggccaggccaccgcc
ctgggggctcaggcgagccatgtggctcacgggactggggcagggtcagctcagcacgcc
ccctccttggcaggagctgcaaagcctgcaggaagctatccctacgccgctcctccggga
ggcccttccctgcagaagccctttgtgcagccaggagctgcacctccaccggtgacccag
cccttaactccgctccatcccccttcaaggccacctttgggacctccaccacttggtggc
ccacctttaacgaggccaccagcccaggcagcaggagcagctagcacacagcctctgctg
aatgcagctgcaagtcaggaaggtgatgctcctgccggcgacggggcggcgctgcacaac
agctacgatgcaatagaaggcggtggcctcatggcaagcccccatgcttctcctgcaccc
tccaagctgaacagggctgttggctactcctaccctgccctgcggccgggctaccaaaac
gctgccggccccggagcaccaggaacgcagtacccagagggagcaaaacacttcccccag
cctgtcctgggcaccaatcacctcactgcatctctgggtggcctgagcctacagcaagag
ggactaagatctgtgaatcttcttcaagaaaggaacattcttcccacaaccctcttgaag
gctcctgtcccaaacttgcatgaagaaatccagaggctcaactgtaaccctgagttgttc
cgctgtaccctgactaacattcctcaaactcaggccttactgaataaagccaaacttcct
ttggggctcctgcttcatcctttcaaagacttatcgcaactgccggtggtgacgtcgagc
accatcgtgcggtgccgctcctgccgcacgtacatcaaccccttcgtcagcttcctggac
cagaggaggtggaaatgcaacttgtgctacagggtgaacgatgtgcctgaggacttcatg
tacaatcctgtcacaagagttcacggagagcctcataaaaggcctgaagtccagaatgct
accattgagtttatggctccatctgaatacatgctccggccgccccagccgcctgtgtac
ctctttgtgttcgacgtctcgcacaacgccgtggagacagggtacctgagcacagcctgc
cagaccctgctggacagcctggactcgcttcctgggaacactagaacgaaaataggcttc
ataacatttgacagcacaatccatttctacagccttcaggaaggcctctctcagccccag
atgctgatagtgtcagatattgaagatgtctttgtaccaatgccagagaacttactagtc
aacttaaatgaaaataaagagctaattcaagatctgttgaagaccttgccgcagatgttt
accaagtccctggaaactcagagtgctctggggcctgccttacaggctgcctttaagctg
atgtcccccactggaggcagaatctctgtcttccagacacagcttccatcggtggggatg
ggagcgctgaagcctcgggaagagccaaaccaaagatcgtctgcaaaggacatacatctg
acaccatccactgacttctacaagaagctagccttggactgctcaggccagcaggttgca
gtggatttattcctcctcagtggacaatattctgacttggcttctctaggttgcatatcc
aggtactctgcaggcagtgtctattactaccaatcctaccaccacaaacacaaccctgtg
caggtggagaagctgcagaaggagctgaagcgatacctcacgaggaagattggctttgag
gctgtcatgaggataagatgcaccaaaggtctctccatccacaccttccacgggaacttc
tttgtgcgctccacagacctgctgtccctgcccaacgtcaacccggacgcgggctacgcc
gtgcagatggccgtggaggagagcctcacggacatgcaggtggtctccttccagtcagct
ctcctctacacctccagcaaaggggaaaggaggattcgtgtccacaccatgtgcttgcct
gtggtgacaacactgagtgatgtctacctgggggcagacgtccaggccatcaccgggctg
ctggccaacatggccgtggaccggtcggtgtcggcctcgctgagcgacgcgcgcgacgcg
ctggtgaacgcggtcatcgactccctggccgcctaccgcggcgccgtgctcagcctccag
cagcccggcctcatggccccgcactcgctgcgcctcttccccctctacgtgctggcgctc
ctcaagcagaaagccttccagaccggcaccagcgcgcggctggacgaccgcatcttcgcc
atgtgccaggtgaagaaccagcccctcgtgtacctcatgctgatgacgcaccccagcctc
tacagagtcgacaccctcacagatgagggggctcttaacatcaatgacagaactatacct
cagccacccctcctgcagctgtcagtggagaagctgagcagggatggtgcttaccttatg
gatgctggctctgtgatgtttctgtggattgggaagaactgtgggcagagctttatcagc
caagtccttggagtcccaaattatggctcaatcccacagaacatgacacagctcccagaa
cttgacactgcagagtccatcagaacaacaactttcattgcctggctgagggaacagaga
cctttcttccctatactctatgtagtaaaggatgagagtccactgaaatcaagttttctg
caaaatatgattgaagacagaacagaatcagccttatcatactatgaattcctcctccat
atacagcagcaagtgaacaaatga
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