Dryobates pubescens (Downy woodpecker): 104309632
Help
Entry
104309632 CDS
T08526
Symbol
DEPDC5
Name
(RefSeq) DEP domain-containing protein 5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
104309632 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104309632 (DEPDC5)
Membrane trafficking [BR:
dpub04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
104309632 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
104309632
NCBI-ProteinID:
XP_009909266
LinkDB
All DBs
Position
Unknown
AA seq
1601 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFSKWKEKNCSHEVTVVLFSRTFYEAKSIDEFPEAQRA
SIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPPGYNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFQVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRCGPGDSRLGDDYNIPHWINHSFYTSKSQLLCNSFT
PRIKLAGRKPQTEKAKSNRDASLGAPKDAENALPIQVDYDGYDAQVFRLPGPSRAQRCTT
FSAVRERESRTRKSSSSYDVSCSPSLQSRTLPPEEVRSQASDDSSLGKISNILMIPRPHL
HQCEVSSSLGYTSTRDVLENMLEPQQRDSSAPGRFHVGSAESMLHVRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGNGQQDLTHSSAELLE
LAYHEATGRHASARHPGDSAAFLGFSAAEEYSNGLAGTNGAGMNLKTQNKESSEDAASNS
PDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLPE
ADMDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQPKPQKPATAVPPPLSSSPLYSRGL
VSRNRPEEEDQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHSDSE
FVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACISATKRIV
EGEAHCDVYGDRPRSEEEEWQLLDGFIRFVEALNRIRRRHRSDRMIRKGSAMKGLQIAGP
IPTHSLEQSGPPIGKKGTSALSALLQMEASQKSLGEQQAALLSGKSSGQPSESGSIAITP
TYVDSPRKDGAFFMDFVRSPRTASTFYSQVSIDQSVPGASDGSTLVTTGQLPDRGNTQPL
GSSQNVAEQGYPTAGAAEGSSQQCSASSLTSSSTLMEILEAMKHPTTGVQLLSEQKGLAP
SCFISAEVVHWLVNNVEGVQTQAMAIDIMQKMLEEQLIVHASGEALRTFIYGFYFYKIVV
DKEADRVGMQQPAMWHTAAMDDFSAFQRKWFEVAFVAEELLHSEIPAFFLPWLPSRPASY
ASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSFSAA
FEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPL
NVSCLLKEGSEHLFDGFEPETYWDRMHLLQEAIARRFGFVQDKYSASAFNFPAENKPQYI
HVTGTVFLQLPYSKRKFSCGQQRRRRNSTSSTTQNVFCEERVGYNWAYNTMLTKTWRSSA
TGDERFADRLLKDFTDFCWNKDSRLLSFWTDCLEKMHASAP
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaaggtgtacaagctcgtcatacataagaagggttttggaggcagtgat
gatgagctggtggtgaatcctaaagtatttcttcagatcaagctgggagatgttgtggaa
attgcccatcccaatgatgagtacagtcctctgcttctgcaagtgaagtccctcaaggaa
gatctgcagaaagaaactataagtgtggatcagacagtggcacaagtgttccgcctgcgg
ccataccaagatgtccatgtgaatgtcgtggatccaaaggaggtgaccttggacttggtg
gagctgaccttcaaagatcagtatattgggcgtggggacatgtggcggctgaagaaaagc
ttggtcagcacttgtgcttacgtcacccagaaagtggagtttgcagggatcagggcacag
gcaggtgaactgtgggtgaagagtgagaaggtcacttgtggctacatcagtgaggacacc
cgggttgttttccgctccacttcagccatggtttacattttcatccagatgagctgtgaa
atgtgggattttgatatttatggggacctgtactttgagaaagctgtgaatggtttcctt
gctgatctcttctcaaaatggaaggagaagaactgcagccatgaagtgacagtggttcta
ttttctagaacattctatgaagccaagtctatagatgagttccctgaagcccagcgtgcc
tccattcggcaggaccatgagggaaggttctatgaagatttttacaaagttgtagttcag
aatgagaggcgagaagagtggacctcgttgcttgtcaccatcaaaaagcttttcatccag
tatcctgtgctggtacgcctggagcaagcagagggttttcctccgggctacaactctacc
tcagcacaagggaactacctggaggccataaatctttcattcaatgtgttcgacaagcac
tacatcaaccgcaacttcgaccgcaccggccagatgtccgtcgtcatcacgcccggcgtc
ggcgtcttccaggtggatcggctgctgatgatcctcaccaagcagcgcatgattgacaat
gggataggtgtggacttggtatgcatgggagagcaaccattgcatgctgtaccactcttt
aagctccataatcgctgtgggcctggtgactccagactgggtgatgactacaatatccca
cactggataaaccacagtttctacacatccaaaagccagctcctgtgtaacagctttact
ccacggatcaagctggcaggaaggaagccacagactgagaaagcaaagagtaaccgagat
gcctcattaggggctccaaaagatgctgagaatgccctgcctatccaggtggattatgat
ggctatgatgcccaggtgttcagactgccaggcccatccagagcccagcgctgtaccacc
ttcagtgctgtgagggagagagaaagtcgtaccaggaagagctccagttcctatgatgtc
tcctgcagcccttctctgcagagccgcacactgccccccgaggaggtgaggagccaggct
tctgatgacagctcattgggcaagatctccaacatcctgatgatcccacggcctcatctg
caccagtgtgaagtcagcagctctttgggctataccagcaccagagatgtccttgagaac
atgctggagcctcagcagcgtgactccagtgcccctgggaggttccacgtgggcagtgca
gagtcgatgctgcacgtgcggcccggggggtacaccccgcagcgtgccctcatcaaccct
ttcgccccgtcccgcatgcccatgaagctgacctccaacaggcggcgctggatgcacacc
ttccccgtgggcccatcaggagaagctatccagatccatcatcagacccgtcagaatatg
gcagagatgcagggcaacgggcagcaggatttgacacactcctctgctgagctgctggag
ctggcttaccatgaagccacagggaggcacgccagcgctcggcaccctggtgacagcgcc
gctttcctgggcttcagtgcagcagaggagtactccaatggcctggctggcaccaacggg
gcagggatgaacctcaaaactcagaacaaggagtcctcggaagatgccgcttctaactct
ccagatccaattctgacgctgtctgctccccccgtagtgccaggcttctgttgtacagtt
ggagtggactggaagtctctcacgactccggcgtgcctccccctcaccaccgactacttc
cccgaccgccagagcctgcagaacgactacaccgagggttgctatgacctccttccagaa
gctgacatggacaggagagatgaggaaggagtgcagatgacagcccagcaggtgtttgag
gagttcatttgccagcggctcatgcagggctatcagatcattgtgcagcccaagccgcag
aagccagccacagccgtgccgcccccactcagcagcagtcccctctacagccgaggtctt
gtgtcaagaaaccgtcccgaggaagaagatcagtactggctgagcatgggcaggaccttc
cacaaagtgacactgaaagacaaaatcatcactgtgactcgatacctgcccaagtatcca
tacgaatctgctcagataaattacacttacagcttgtgcccctcacactctgactctgaa
tttgtctcttgctgggtagagttttcccacgagagactagaagagtacaagtggaattac
ttggatcagtatatctgctctgccggctccgaggatttcagtctgattgaatccctcaag
ttttggcggacccgcttcctgctgctgccggcctgcatcagcgccaccaagcgcatcgtg
gagggggaggcgcactgcgatgtgtacggggacaggccccgctccgaggaggaggagtgg
cagctgctggacggcttcatccgcttcgtggaggccctgaaccgcatccggcggcgccac
cgctccgatcggatgatccggaaagggtctgccatgaaagggttgcagattgctggtcca
attcccacccactctctggagcagtctgggcctcccattgggaagaaaggaacctcagca
ctctcagctctgctgcagatggaagccagtcagaagagcctgggggagcagcaggcagcg
ctgctgtctgggaagagcagcgggcagccctcggagagcgggagcattgccatcaccccc
acctacgtggacagcccacgcaaggatggggccttctttatggattttgttcgcagccca
cgcacagcctccaccttctactcacaggtctccatagatcagtcagttcctggagcttca
gatggcagcacattggtaaccacagggcagttacctgacagggggaacacccagcccttg
ggaagctcccagaatgtggcagagcaaggatatcccacagctggtgctgcagagggcagc
tcccagcagtgctcagccagctctctaacttcctcctctacactgatggagattctcgaa
gccatgaagcaccccaccacaggggtccagctgctctccgaacagaaaggcctcgctccg
tcctgcttcatcagtgcagaagtggtgcactggctggtgaacaatgtggaaggggtgcag
acccaggccatggccattgacatcatgcagaaaatgctggaagagcagctcattgtccat
gcatctggagaagctttgagaacctttatttatggcttttatttttacaagattgttgtg
gacaaagaagcagaccgagtgggcatgcagcagcctgccatgtggcacacagctgccatg
gacgacttctctgccttccagaggaaatggtttgaggtggcctttgtggcagaagagctc
ctgcactcagagatcccagccttcttcctgccctggctgcccagccgcccagcctcctat
gcaagtaggcacagttcctttagccgcagtttcggaggacggagccaggcagctgcactc
ttagctgccacggtgcctgagcagcggacggtgaccctggatgtggacgtgaacaaccgc
acagaccggctggagtggtgcagttgctactaccatggcaatttctccttcagtgctgcc
tttgaaatcaagctgcactggatggcagtgactgcagctgtcctctttgagatggtccag
ggttggcaccgcaaagccacatcctgcgggttcttgctggtgccggtcttggaagggccc
tttgccttgcccagctacttatacggagacccacttcgagctcagctgttcatcccactc
aatgtcagctgcctgttgaaggagggcagcgagcacttgtttgatggctttgaacctgaa
acatactgggaccgtatgcatctcctccaggaagcaatagcacgcagatttggatttgtg
caagataaatactcagcctctgccttcaacttcccagctgagaacaagccccagtacatc
catgtcacagggacagtgtttttgcagctgccctattccaagcggaagttttcctgcggg
cagcagcgccggcggcgcaactccaccagctccaccacccagaacgtgttctgcgaggag
cgcgtgggctacaactgggcctacaacaccatgctgaccaaaacctggcgctccagcgcc
actggcgacgagaggtttgctgaccgcctgctgaaagacttcacagacttctgctggaac
aaagacagccgcctgctctccttctggacagactgtctagagaagatgcatgctagtgct
ccatga
DBGET
integrated database retrieval system
