Dryobates pubescens (Downy woodpecker): 104309710
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Entry
104309710 CDS
T08526
Symbol
PUS1
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpub03016
]
104309710 (PUS1)
Enzymes [BR:
dpub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
104309710 (PUS1)
Transfer RNA biogenesis [BR:
dpub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104309710 (PUS1)
Prokaryotic type
104309710 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
WC-rich
Motif
Other DBs
NCBI-GeneID:
104309710
NCBI-ProteinID:
XP_009909364
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MSREGSVLLQGRGPEDPPIFTMAEDLRAAVASQTKRLNSSSEVVERLEENGHQNKRLKAG
ADEEDAEDQNKKSPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVQSGCIPE
NHGEDMKKMSFQRCARTDKGVSAAGQIVSLKVRLIDDILEKINNHLPSHIRILGLKRVTG
GFNSKNKCDARTYSYMLPTFAFAHKDQDVQEEAYRLDRETLEKVNKLLACYKGTHNFHNF
TSQKGPRDPSAKRYIMEMYCGEPFVRESIEFAVIKVKGQSFMMHQIRKMIGLVIAIVKGY
AAESILERSWGEEKVDVPKAPGLGLVLERVHFEKYNRRFGNDGLHEPLEWTREEEKITVF
KEQHIYPTIINTEREEKSMANWLNTLSIHDFNSSAVEMQVNHKNSKNSSDLEGSDGCGDD
SD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgggaagggtctgtcctgctccaaggccggggaccagaggacccgcctattttc
acaatggctgaggatctgagagcagcagttgccagccagacaaagagactgaacagcagc
agtgaggtggttgaaaggctggaagaaaatgggcatcaaaacaaaagattgaaggcaggt
gcagatgaggaagatgcagaggaccagaataaaaagtcaccgaaaaggaagattgtgttg
ttgatggcatactccgggaaaggctaccatgggatgcaaaggaacgtgggatcctcacaa
ttcaagacaattgaagatgacttagtttcagcccttgttcagtcaggctgcattccagaa
aaccacggggaagatatgaagaaaatgtcttttcagcggtgtgctcgaacagataagggt
gtgtctgcagctggacagattgtgtcgctaaaggtcaggctaatagatgacatcttagaa
aagatcaataaccatcttccttctcacatcagaattctgggtctgaagagagtcactggg
ggattcaactccaagaacaaatgcgacgccagaacctactcttacatgctgccaacgttt
gcctttgcccataaagaccaggatgtgcaagaagaggcttatagactggacagagagacc
cttgaaaaagtcaataaactgcttgcctgctataaaggaacacacaacttccacaacttc
acgtcccagaagggacccagggaccccagcgccaagcggtacatcatggagatgtactgc
ggagagcccttcgtgagggagagcattgaatttgcagtgatcaaagtgaaaggtcagagt
ttcatgatgcaccagataaggaagatgattgggctggtgatagcgattgtgaaagggtat
gctgcggagtccatcctagagcgcagctggggtgaggagaaggtagatgtccccaaggcc
cctggacttgggctggtgttggaaagagtacactttgaaaagtacaacaggcgttttggg
aacgatgggctgcatgagccgctggagtggacgcgggaggaggagaagattactgttttc
aaagagcagcatatttatcctaccattatcaacacagaaagggaggagaaatccatggca
aactggctaaacaccctctccattcatgacttcaactcatctgctgtggaaatgcaagtt
aaccacaaaaattccaagaacagcagtgatctcgaaggcagcgatggttgtggtgatgat
tccgactaa
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