Dryobates pubescens (Downy woodpecker): 104309820
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Entry
104309820 CDS
T08526
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104309820 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpub03400
]
104309820 (XRCC5)
DNA repair and recombination proteins [BR:
dpub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
104309820 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA
VWA_2
POPDC1-3
Motif
Other DBs
NCBI-GeneID:
104309820
NCBI-ProteinID:
XP_009909485
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MSSSAPGEESSLEQAKKIMTKFVQRQVFAESKDEVAVVLFGTDGTRNDLASENQYENITV
HRSLMLPDFDLLEDIQDMIKPGSEQADFLDAIIVCMDLLQKQTIGKKYEKRHIEVFTDLK
SPASEDQLEIIIANLKKTGISLQFFLPFPVEVGDGDTSASRHSHVHRNSFPRKGLTEEQK
AGIDMVRKLMHTLDEEGGLEEIYTFRESLERLSVFKKIERRPMPWPCQLTIGSNLSIRIV
AYKSVTEEKVKKIWTVVDAKTHRKSDVQKETVYCLNDDDETEVPKDDTIQGFRYGSDIVP
FSKEDEEQMKYKTEAKCFSVLGFSRSSQIQRHYYMGNQALKVFAAKDDENAAVAFSALVH
ALDELNMVAIVRYAYDRRCNPQVGAAFPYIKDKYECLIYVQLPYMEDIRQYIFSSLKNNK
KCIPTADQLSAVDSLIDSMSLICEDDDGETYEDLFKPSKIPNPHFQRLYQCLQHKAFHPS
EPLPPVEEHLLEMLEMPCVVKERCQAPLEKIKALFPLKEVGKKKEEKTAQDIFKENEDEP
NPKKPKIEDEDGSFSIIKLAEGNVTSVGSVNPAEDFRILVRQKNGDFKDVSQQLINRIDQ
FLGNKGSQYYMKGINCIRVFREEAMKLSKVQCFNDFMQDLKSKVEDKALADFWEIMVQDR
ISLITKDEAEESSVTGEEAEKFLALKEKENETLPPTDEGGDVDDLLDMM
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttctgctcctggtgaggaatcttcacttgaacaagccaagaagattatgaca
aagtttgtgcagcgacaggtttttgctgagagtaaagatgaggttgctgtggttttgttt
ggtactgatggtactaggaatgaccttgccagtgagaatcagtatgaaaacattactgta
cataggtcactaatgctaccagattttgatctgctggaagacattcaagatatgattaaa
ccaggctctgagcaagcagactttctggatgcaattattgtgtgtatggacttgcttcag
aagcaaacaataggaaagaaatatgagaagagacacattgaagtgtttacagatcttaag
agtcctgccagtgaggatcagctggaaattattattgctaacttgaagaaaacaggaatt
tcacttcagttctttctgccatttccagtggaagttggtgatggagatacaagtgccagc
agacattctcatgtgcacaggaactcttttccaagaaagggtttaactgaggaacagaag
gcaggcattgacatggtgaggaaactgatgcatactttggatgaagaaggagggctggaa
gaaatttacactttcagagagagcctggagcgtctttcagtgtttaagaaaatagaaaga
agacctatgccttggccctgccagctcactattggttctaatttgtctataaggattgtt
gcctacaaatcagtcacagaagagaaggtgaaaaagatttggacagttgtggatgctaaa
acccacagaaaaagtgatgtgcaaaaagaaactgtttactgcttgaatgatgatgacgag
acagaggttccaaaagatgatactattcaagggtttcgctatgggagtgatatagttcct
ttttccaaggaagatgaagagcaaatgaaatacaaaacagaagcaaaatgtttttctgtt
ttgggattcagcagatcctctcagatccagagacattactacatgggcaaccaagctctg
aaggtctttgcagcgaaagatgatgagaatgcagcagttgctttttctgcccttgtccat
gcattggatgagttgaatatggtagctatagtacgttatgcttatgatagaaggtgcaac
ccacaagttggagctgcttttccatacattaaggataaatatgagtgtctcatctatgtg
cagctaccctacatggaagacataagacagtatatattttcatccttgaaaaacaataaa
aaatgcattcctacagcggatcagttgtctgctgtggactctctgattgattctatgagt
ttgatttgtgaagacgatgatggagaaacttacgaggacctatttaagcccagcaaaatc
ccaaaccctcattttcagaggttatatcagtgtttgcagcataaggcttttcaccccagt
gagccactgccaccagttgaagagcaccttttagagatgctggagatgccctgtgtggta
aaagaaaggtgtcaggctcctctcgaaaaaataaaagcacttttccccctaaaggaagtt
ggcaagaaaaaagaagagaagactgctcaagacatcttcaaagaaaatgaagatgaacct
aaccctaagaaaccaaaaattgaagatgaggatggtagctttagcatcataaaacttgct
gaaggcaacgttacctctgttggcagtgttaacccagcagaagatttccgaattctggtg
aggcagaaaaatggtgacttcaaagatgtgagtcagcagctgataaaccgcattgatcag
ttcctaggaaataaaggttcacagtactacatgaaaggcatcaattgtatcagagttttc
agagaggaggcaatgaagctctccaaggtgcagtgctttaatgattttatgcaggacctg
aaatccaaggtggaagataaagccttagctgatttctgggagatcatggtacaagacaga
atttctttgatcactaaagatgaagcagaggaaagttccgtgactggtgaagaggcagaa
aagttcttggctctgaaagaaaaggaaaatgaaacccttcctcccacagatgaaggtggt
gatgtggatgatttgctggatatgatgtga
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integrated database retrieval system
