Dryobates pubescens (Downy woodpecker): 104309843 Help Entry 104309843         CDS       T08526                                  Symbol PMS1 Name (RefSeq) PMS1 protein homolog 1   KO K10864   DNA mismatch repair protein PMS1 Organism dpub  Dryobates pubescens (Downy woodpecker) Brite KEGG Orthology (KO) [BR:dpub00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:dpub03400]     104309843 (PMS1) DNA repair and recombination proteins [BR:dpub03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     MutL homologs      104309843 (PMS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_mis_repair HMG_box HATPase_c_3 HMG_box_2 HATPase_c CHDNT HMG_WDHD1 HMG_box_5 KTI12 Motif Other DBs NCBI-GeneID:  104309843 NCBI-ProteinID:  XP_009909510 LinkDB All DBs Position Unknown AA seq 933 aa AA seqDB search MKQLPAETIRLLSSSQVITSVVSVVKELIENSLDADATNIDIKLENYGFNRIEVRDNGNG IKAADVPVMAVKHYTSKISSSEDLDRLTTYGFRGEALGSVCSISEVLITTKTAADEFSTQ YALDSTGHITLKKPSHLGQGTTVTVLKLFKNLPVRKQFYSTTRKCKEELKKIQELLMAYG IIKPELRITLTHNKAVIWQKTRVSDHKMACMSVLGTAVMGSMVPFQHCCEDPEINLSGFL PKAESDSSLTSLSSSERSFIFVNNRPVQQKEILKLIRQYYSLATQKDCTRLYPVFFLNIT VPASAVDVNVTPDKTQVLLHYKESVLLAVENVLKSLYRPLPAAVPGASNKTDVTAEDMFA PGTEQTDVVVNEMGPSGNDDPRAHTSFLSLSSDVQNCQAGKNTEICLNHQAFRGDNVHSG LDKREVSKSDAFPDSSFTFVCEEEQNGRNLPDTASNAVPVDPKASRVDEHLLSWDSSDKR VINEEALVPQTPPEISADHWSRGSAFKNPVGDNLEPVKILIPEAEGAVNEQHEQSAEQST RPRGSHQATKNRNAISDKFGRVTGYDLISSRIIKKPKSAMGFFTQEHRPALVADNPKTSM DDILLLIEEKWKNLSEEEKNNYEMKAAKDMERYNREVKKAMGQRGHRPAKETEKQKPRLK ASPSDQQKLDKIFHAQIEKKRKPEEPTKIVTVPFSLSSCRHYLQRCGRNDSDEEELFLIR RQSFPDVWIFATDKKLMLLNPYRLEEALLCKRLLMNHKLPVEKLDKPIVLTDSLIGGAQY MAALYKMQKDYQNFNGSSHLSDPRLVANGFQIIMIEGASAAESHLEIEGLANCLPYYGVS DLKEILNAVVNGNAKEVYECRPLKVVNYLEGEAVRLARQLPLHLSKEDVQSTIHRMKQQL GKEHKGCVHGRPFFHHLTDIPEVYKHNSMEISQ NT seq 2802 nt NT seq  +upstreamnt  +downstreamnt atgaaacagctgccagcagagactattcgtctgctttcaagttctcaggtgatcacatca gttgtcagtgtggtgaaggagctgatagaaaattccttggatgcagatgccacaaacatt gatattaaactggagaattacgggtttaacagaatagaagtaagagacaatggcaatgga atcaaggctgctgatgtcccagttatggcagttaaacattacacctccaaaatcagctct tctgaggaccttgacaggttgacaacatatggtttccgtggggaagctttgggatcagtt tgctccatatcagaggttttgatcacaaccaagacagctgctgatgagttcagcactcag tatgctttggatagcactgggcacataactttgaaaaagccttcccatcttgggcaaggt actacagtaacagtcctaaagttgttcaagaatcttcctgtgagaaagcagttttactca acaactagaaaatgcaaggaagagctgaaaaaaatccaagagctcctgatggcatatggt atcatcaaaccagagctgaggataaccttaacacataataaggcagttatttggcagaag accagggtgtcagatcacaaaatggcctgtatgtcagttctgggaacagccgttatgggc agtatggtaccttttcaacactgctgtgaagatcctgagataaacctttctggatttctc ccaaaagctgagtcagacagttccttgacaagcctttcgagttcagaaaggagtttcatt tttgtgaataatcgtcccgttcagcagaaggaaatactgaagctcattcgacagtactac agcctggcaacgcagaaggattgtactcgtttgtatcctgttttctttctgaatattact gtgcctgcctctgctgtggatgtgaatgtaacacctgataaaactcaagtcttgctgcat tataaggaatctgtcttgcttgctgttgaaaatgtgttgaagtcgctgtacaggccacta cctgctgcagtccctggtgcaagtaacaaaacagatgttaccgccgaagacatgtttgct cctggaacagagcaaacagatgtggtggttaatgaaatgggaccatctggaaacgatgat ccccgtgctcatacttcattcctttcactcagcagcgatgtgcaaaactgtcaagcagga aaaaacacagagatctgcttaaatcatcaggcatttcgtggtgataatgtgcacagtggc ctggacaaaagagaggtttcgaagagtgatgcctttccagacagttccttcactttcgtg tgtgaggaggagcagaatgggcggaatctgcctgatactgcaagtaacgctgttcctgtg gaccccaaggctagcagagtcgatgagcatctgttgagttgggacagtagtgataaaaga gtgataaatgaggaagccttagtcccgcaaacgccccctgaaatctctgctgatcattgg agtcggggaagtgcatttaaaaatcctgtaggagacaacctggaacctgttaaaattttg attcctgaggctgaaggagcagtgaatgagcagcatgagcagagcgctgagcagagcact cgcccacgaggctcccatcaggccacaaagaacagaaacgcgataagtgataaattcggc cgcgtcacaggctatgatttgattagcagtagaataataaagaaacccaagtctgcaatg ggatttttcactcaagaacatcgcccagcactggtggctgataacccaaagaccagcatg gatgacatcctgctcctcattgaagagaagtggaagaatttgagtgaagaggagaaaaat aattacgaaatgaaagctgctaaagacatggaaaggtacaacagagaggtcaagaaagct atgggacagagagggcaccgaccagcgaaggagacagaaaaacagaaacccaggctgaag gcttccccatctgaccagcagaagctggacaagatatttcatgctcaaattgaaaagaag aggaaacctgaagagcctacaaaaattgtcacagtgcctttttctctgagctcctgtaga cattatctgcagagatgcgggaggaatgattcagatgaagaggagcttttcctgatccgt cgtcagagctttcctgatgtctggatatttgctactgacaaaaagctgatgttgctgaac ccatacagattggaagaagccctcttatgtaaaagattactgatgaatcataagcttcca gtagaaaaactggacaagccaattgtgttaacagacagtcttattggtggagctcagtat atggctgctctttataaaatgcagaaggattaccagaatttcaatggatcaagtcatttg tcagatccaaggcttgtagcaaatggattccagataataatgatagaaggtgcttcagct gcagaaagtcatctggaaatagaagggctggcaaactgtctgccatattatggtgtttct gatttgaaagaaattctgaatgcagtagttaatggaaatgcaaaggaggtttatgaatgt agacccctcaaagtggtaaattacttggagggagaagcagtgcggttagctcggcagctg cccttgcacttgtccaaggaggatgtacaaagcaccattcacaggatgaagcagcagctt gggaaggaacacaaaggctgtgtccatggccgtcctttctttcatcacttaacagatatt ccagaagtttacaagcacaactccatggaaattagtcaatga

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