Dryobates pubescens (Downy woodpecker): 104309918
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Entry
104309918 CDS
T08526
Symbol
TRPM1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dpub04040
]
104309918 (TRPM1)
Ion channels [BR:
dpub04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104309918 (TRPM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
YVC1_C
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
104309918
NCBI-ProteinID:
XP_009909602
LinkDB
All DBs
Position
Unknown
AA seq
1651 aa
AA seq
DB search
MSGSFKRTSFKGSASGSQKGQKAWIEKTFSKRECIYVIANNKDISRCCCGQLINQHIPPP
PSITANKNGEETKQVEAQPEKWSVSKHTQTYPTDAYGNLEFQGGGHSNKAMYIRVSYDTK
PDSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTTGAWIFTGGV
STGVIRHVGDALKDHSSKSRGRICAIGIAPWGIVENKEDLIGKDVTRVYQTMSNPLSKLS
VLNSSHTHFILADNGTLGKYGAEVKLRRQLEKHISLQKINTRLGQGVPVVGLIVEGGPNV
ISIVLECLREEPPLPVVICDGSGRASDILSFAHKYSEEGGIISESLRDQLLVTIQKTFNY
NRNQAHQLFVILMECMKKKELITVFRMGSEGQQDIEMSILTALLKGTNASAPDQLSLALA
WNRVDIARSQIFVFGHHWPPLGSLTAPDGTAPEKEKKSPAPQTKGARGKGKGKKKGGKGK
EEPEEETDPRKLELLNWVNSLEQAMLDALVLDRVDFVKLLIENGVNMHHFLTIPRLEELY
NTRLGPPNTLHLLVRDVKKGNLPPDYHISLIDIGLVLEYLMGGAYRCNYTRKSFRTLYNN
LFGPKRPKALKLLGMEDDEPPTKGKKKKKKKEEEIDIDVDDPEVSRFQYPFHELMIWAVL
MKRQKMALFLWQRGEETMAKALVACKLYKSMAHESSESELVDDISQDLDNNSKDFGQLAV
ELLDQSYKHDEQIAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGRL
RMRKNPGLKVIMGILFPPTILFLEFRSYDDYSYQTSRENEEGREKEEENADANADTGSRK
GDEENGKKKQKSLPIGTKIYEFYNAPIVKFWFYTISYLGYLMLFNYIILVRMERWPSVQE
WIVISYIVTLALEKIREILMSEPGKLSQKVKVWLQEYWNITDLVAISVFIIGAILRLQSQ
PYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFG
VARQAILHPDEEPSWRLARNIFYMPYWMIYGEVFADQIDLYAMEINPPCGDNLYDDDGKR
LPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTF
HDRPVLPPPMIIFSHIYIIIKRICCRCRKGEGDQDERDRGLKLFLNEEELKKLYEFEEQC
VEEYFQEKEDEQQSSNDERIRVTSERVENMSMRLEEVNEREHFMKASLQTVDLRLSQLEE
LSGRMVNALEKLAGVDKSQLTYTRSRASSECDAAYLLRQSSVNSSDGYSMYRYHIGGDEL
TYDDSAIPMSPALEQRRKAHSIGTKEDGVDPKMLVPEHHTSLHYTSSANAVATADDSKSM
LEMAQNASMPHSGSGGLGDEKQGICKSDGMIPQSINRMDAVTNSQSVPRSDFQNTQLKVE
RTKLEATISYPLDKSKAMRYFPPETFSACQTTMMKSRSFIFAQGGKMVGGVNNWTAEYST
IMDQVCPSAVEQWATEWKYEVEQQLSQERPPEYPGFVSEAERQAEQKQLQMDTDDDSDVG
EAGMSASYTSMPTTVKAEKDNLLSVKPERTSGFPSVRSKSLHSHSRKAKSVKDKLNRPGH
ASSVTNLVVAFGSATEEQKARQENASTETEC
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctccttcaaacgcacttcatttaagggctcagcatctggatcacaaaagggt
caaaaggcttggatagagaagaccttttcaaaaagagaatgtatctatgtaattgccaac
aacaaagacattagcaggtgctgctgtggacagctcattaaccaacatattccacctcct
ccaagtataacagctaataaaaatggagaagaaacaaagcaagtggaagctcagccagag
aaatggtctgtcagtaaacacacccaaacttacccaactgatgcctatggaaaccttgaa
ttccaaggaggagggcattcaaataaggccatgtatatccgtgtgtcatatgacactaaa
ccagattctctgctacatctcatggtgaaagactggcaactggaactgcccaaactttta
atctctgtccatggaggcctccagaactttgaaatgcaacctaaactaaagcaagtattc
ggaaaaggtctgataaaggctgccatgaccacaggagcttggattttcactggaggtgtt
agcacaggtgttattcgtcacgtgggagatgccttgaaagatcattcttccaaatccaga
ggacgaatatgtgccataggaattgcaccgtggggcattgtagaaaacaaggaagatcta
ataggaaaagatgtaacacgggtttaccaaacaatgtcaaaccctctaagtaagctctcc
gtgctcaacagttcccatacccatttcattctggcagacaatggtacgctaggtaaatat
ggagcagaagtaaagttacgacgtcagttggaaaaacacatttccctccagaaaattaac
acacgtctgggacaaggtgttcctgtagttgggctcatagtagaagggggtcccaatgtg
atttccatcgtcttagaatgtctgcgagaagagccccctcttcctgttgtgatttgtgat
ggtagtggtcgagcatcagatattctgtcatttgcacacaagtattcagaagaaggaggg
ataataagtgaatcccttagggaccagcttctagttaccatccagaaaaccttcaactac
aacaggaatcaagctcatcaactatttgtcattcttatggagtgcatgaaaaaaaaagaa
cttattactgtgtttcgcatgggatctgaagggcaacaggacattgagatgtccatctta
actgctctcctcaaaggtaccaatgcatctgctccagaccagctcagcttggctttggcc
tggaatcgtgtagacattgcgcgcagccaaatcttcgtctttggacaccactggccacct
ctaggaagccttacagctcctgatggaacagctcctgagaaggaaaagaaatctccagcg
cctcagactaaaggagccagagggaagggaaaagggaaaaaaaagggaggaaaaggaaag
gaagagccagaagaagaaacagacccaagaaagcttgaactcctgaactgggtgaattcg
ctggagcaggctatgctggatgcactggttctggatcgagtggactttgtgaaactgctc
atagagaatggagtgaacatgcaccacttcctcactattcctcgcctggaagagctttat
aatactagactgggtccaccaaatacactgcatttgctagtcagagatgtgaaaaaggga
aatcttccaccagattatcatatcagcctaatagatattggtcttgtacttgaatatctc
atgggtggagcttatcgctgcaattatactcggaaaagttttcgtactctttataataat
ttatttggaccaaagaggccaaaagctcttaaactactaggaatggaggatgatgagcct
cccaccaaagggaagaagaagaagaagaaaaaggaggaagagattgatattgatgtggat
gacccagaagttagccgcttccagtacccctttcatgaactgatgatttgggctgtgctg
atgaaacggcaaaagatggcgctcttcctttggcagcgaggggaggaaaccatggccaag
gcactagtagcctgcaaactgtacaaatctatggcccatgagtcttctgagagtgagctg
gtggacgacatctctcaggatctggacaacaactcaaaagattttggccagctggctgtt
gaacttttggaccagtcctataaacatgatgagcagattgccatgaaactgctaacctat
gaactgaaaaactggagtaattctacctgcctgaaattggctgtggcagctaaacacagg
gacttcattgctcacacatgcagccagatgctcttaacagatatgtggatggggcggcta
cgcatgcggaaaaatccaggccttaaggttataatggggattctcttccctcccaccatc
cttttcctagagtttcggagttatgatgattattcttaccagacatcaagagaaaatgag
gaaggcagagaaaaggaggaggaaaatgcggatgcaaatgcagatacaggctcccgaaaa
ggagatgaagagaatgggaaaaaaaaacaaaagagcctcccaattggaacaaagatctat
gaattctataatgcacctattgtcaaattttggttctacacaatatcatacctgggctac
ttgatgctgtttaattatatcatcttggtgcggatggaacgatggccatcagtccaggaa
tggattgtcatctcttacattgtgacactggctttagagaaaataagagagattctgatg
tcagagcctggcaagttgagccaaaaagtgaaagtttggctccaagaatactggaatatt
actgacctggtggctatctcagtatttattataggagcaattcttcgcctgcagagccag
ccttacatgggttatggaagagtgatttactgtgtagatatcattttctggtacatcaga
gtactagatatctttggtgtgaacaaatatctgggaccttacgtcatgatgattggaaag
atgatgattgacatgctctactttgtggtcatcatgcttgtggttctgatgagttttggt
gtagcccgccaagctatcctgcacccagatgaggagccttcttggagattagctcgcaac
atcttctatatgccctactggatgatctatggagaggtgttcgcagatcagatagacctc
tatgccatggaaattaatcctccttgtggggacaatctttacgatgatgacggtaaacgc
ctccctccatgtataccaggggcatggctcactcctgctattatggcctgttacctcttg
gtagcaaatatcctgttggtaaacctgctgattgctgtcttcaataataccttctttgag
gtaaaatcaatatccaaccaagtctggaagttccagcggtaccagctgatcatgacattc
catgacagacctgtcctcccaccaccaatgattatcttcagccacatctacataatcatc
aagcgaatctgctgtcgctgcaggaagggtgaaggagaccaggatgagcgtgacaggggg
ctgaagttatttctgaatgaggaggagctaaaaaagctgtacgaatttgaagaacagtgt
gtagaagaatacttccaagaaaaagaggatgagcagcaatcatctaatgatgaacgcatc
agagttacctctgaaagagttgaaaatatgtctatgaggctagaagaagtgaatgaaaga
gaacattttatgaaagcttcccttcaaacagttgaccttcgactctctcagttggaagaa
ctgtctggtcggatggtgaatgctcttgagaaactggcaggtgtcgacaaatcccagctg
acgtacacacgttcgcgcgcttcctcggagtgtgacgctgcctatctcctgcggcaaagc
agtgttaacagctcggatggctacagcatgtacagataccacattggtggtgatgagtta
acatatgatgacagtgccattcctatgtcaccggccttggaacagcgtagaaaagcccat
tctattggtaccaaagaagatggagtagacccaaagatgctggttccagaacaccatacc
agtctccattatacctctagtgctaatgcagttgccacagcagatgacagtaaatctatg
ttagaaatggcacagaatgcttctatgcctcattctggttcaggtggtttgggggatgaa
aagcaggggatttgcaagagtgatggaatgattcctcaaagtataaaccggatggatgct
gttacaaacagtcagtcagtaccaagatccgatttccagaacactcagctaaaagtagaa
cgtaccaagttagaagctaccatctcttaccccttggacaaatctaaagcaatgcgctat
tttcctcctgaaacattcagtgcttgtcaaaccactatgatgaagtcaaggagcttcata
tttgcacagggtgggaagatggttggaggagttaacaactggactgctgagtatagtacc
atcatggatcaggtgtgcccttcagcagttgaacaatgggccacagagtggaaatatgaa
gttgagcagcaactttcccaagaacgtcctccagagtaccctgggtttgtctctgaagca
gaaaggcaagcagagcagaaacagttacagatggacacagatgatgacagtgatgttggt
gaagcaggtatgagtgcctcttacacctctatgcctaccactgtcaaggctgaaaaagat
aatttactatcagtaaagccagaaaggacttctgggttcccatcagtaaggtcaaagagt
ttgcacagccattctcgaaaagccaagtctgtaaaggacaaattaaatagaccaggacat
gccagcagcgtaacaaatctggtggtagcatttggcagtgcaacagaggaacagaaagct
aggcaggaaaatgcatccacagaaactgaatgttaa
DBGET
integrated database retrieval system
