Dryobates pubescens (Downy woodpecker): 104309936
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Entry
104309936 CDS
T08526
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104309936 (CHD5)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104309936 (CHD5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
104309936
NCBI-ProteinID:
XP_009909622
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MGWGRATSQEEDGVLEGLEEFFAEEQVAVQKKKKPKKLKDGKAAKSKRRKKEGSNDEVSE
NEEEMEEKSESEGSDYSPNKKKKKKLKEKKPKRKKKDEEEDDNEDGALKEPKSSAQLMEE
WGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNP
FKGSSAAAAAAAIAAAVETVTVAPPLAPSPQPPALPPVIRKAKTKEGKGPGVRKKVKGSK
DGKKKGKGKKVAGLKFRFGGMPSKRKKGSSSEEEEREESDLDSASINSSSVRSECSAGLG
KKGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEG
KWSCPHCKEGIQWEPKEEEEEEEEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLH
CLNPPLPDIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAPLLPALPVLPAPGTELALP
TPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMEEPPAFDYGS
GDEESQREKRKSKDPQYAQMEERFYRYGIKPEWMMIHRILNHSFDKKGDIHYLIKWKDLP
YDQCTWEMDEIDIPFYENLKLLYWNHRELMLGEDTCPLKKLNKKGKKLKEEKLEKPPETP
LVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVF
LYSLYKEGHSKGPYLVSAPLSTIINWEREFELWAPDFYVVTYTGDKESRAVIRENEFSFE
DNAVRGGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSK
FFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIK
KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGN
QVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRD
GGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLL
STRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERI
TQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVQGQRLGVPD
AVTPFPDPLSAKGGAVTPGMKKKHGGTPPGDNKEVEDSSVIHYDDAAISKLLDRNQDATD
DSELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQED
LARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRR
QSRRQLKSDRGPLAPVLGFNTRQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFR
AYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYS
TPDVILEGPESRKGSEVVSSDPNTPVPASPAHLHVGPAALADKAETQVGLQEEKDQVEQK
PRKASDSQVPASAEKVESAEYPEGCDSKEKPREERQEESEKAEPSPEPLGKDEGIPEKEK
PLEKLELSSSPGKGEDREAKPEEAKAEEKEQSEAQQNGDKEEEEDGKKDERNINFRFMFN
IADGGFTALPLTLPRASHGYARWQDIQNDPRYGILNEPFKSEVHKGNYLEMKNKFLARRF
KLLEQALVIEEQLRRAAYLNMTQDPNPPAMALNARLAEVECLAESHQHLSKESLAGNKPA
NAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPTGP
QGSFGSSQIYNSSFGASFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgggctggggcagagccacctcccaagaagaggatggggtgctggaaggacttgaggag
ttttttgcagaagagcaagtggctgtgcagaaaaaaaagaaacccaagaagctgaaagat
ggcaaagctgccaaaagcaagaggaggaagaaggaggggagcaatgatgaagtgtcagaa
aatgaagaggagatggaggagaaatctgagagtgaggggagtgactactcccccaacaaa
aagaagaagaaaaagctgaaggagaagaagccaaaacggaagaagaaagatgaggaagag
gatgacaatgaggatggagctctaaaggagcccaagagctcagcccagctgatggaggag
tgggggcttgatgatgtggattatatcttctctgaggaggattatcacaccctgactaac
tacaaggccttcagccagttcctcaggcctctgattgccaagaagaaccccaagatcccc
atgtccaagatgatgactgtgcttggtgccaagtggcgagagttcagtgccaacaacccc
ttcaagggcagctctgcggccgctgcggccgcggccatcgcggcagcggtggagacggtg
accgtggccccgccgcttgcccccagcccccagccccctgccctgccccctgtcatcagg
aaggccaagaccaaggagggcaagggtccaggcgtgcggaagaaagtgaaaggctccaaa
gatggaaagaagaaggggaaggggaagaaggtggcagggttgaaattccggtttggagga
atgcccagcaagaggaaaaaaggctcctctagtgaagaggaggaacgagaggagtctgac
ctggacagtgccagcatcaacagctcctccgtgcgctccgagtgctctgctggcctgggg
aagaaagggaagaggaggagaaagaaaaagaggatcgaggagggggacggctacgagaca
gaccaccaggactactgcgaggtgtgccagcagggcggggagatcatcctctgcgacacc
tgcccccgagcctaccacctcgtctgcctcgacccggagctggagaaggcccccgagggc
aagtggagctgcccgcactgcaaggagggcatccagtgggagccaaaggaagaggaggag
gaggaggaagaggagggcggtgaggaggaggaggacgaccacatggagttctgccgggtg
tgtaaggacggaggggagctgctgtgctgcgacacctgcccctcctcctaccacctgcac
tgcctcaaccctccgctgcccgacatccccaacggggaatggctctgccctcgctgcact
tgtcctcccttgaagggcaaagtgcagcgcatcctgcactgggcctggaaggagccccca
gcccccctgctgccagccttgcccgtgctgcccgccccgggcacggagctggcactgccc
acgcccaaggtgctggaggggatcccggagcgcgagttcttcgtgaagtgggcaggcctc
tcctactggcactgctcctgggtcaaagagctgcagctggagctctaccacaccgtcatg
taccgcaactaccaacgcaagaacgacatggaggagccccccgccttcgactacggctcg
ggggacgaggagagccagagggagaagcggaagagcaaggacccgcagtacgcccagatg
gaggaacgcttctaccgctacggcatcaagcccgagtggatgatgatccaccgcatcctc
aaccacagctttgataaaaagggagacatccattacctgatcaagtggaaggacctgccc
tacgaccagtgcacctgggagatggacgagatcgacatccccttctacgagaacctcaaa
ctcctctactggaaccacagggagctgatgctgggggaggacacctgccctctgaagaag
ctgaacaagaaagggaaaaagctgaaagaggagaagctggaaaagcctccagagacacca
cttgtggaccctacggtgaagtttgacaagcagccctggtacattgatgccacgggtggc
acgctgcacccctaccagctggagggactgaactggctgaggttctcctgggcacagggc
acagacacaatcctggctgacgagatggggctgggcaagaccgtgcagaccatcgtcttc
ctctactccctgtacaaggagggccactcgaaagggccgtacctggtcagtgcccctctc
tccaccatcatcaactgggagcgagagttcgagctgtgggcccctgacttctacgtggtg
acctacacgggggacaaggagagccgcgccgtcatccgcgagaacgagttctccttcgag
gacaacgccgtccgcggcggcaagaaggtcttcaggatgaagaaggaagctcagatcaag
ttccatgtcctgctcacctcctatgagctgatcaccatcgaccaggcggtgctgggctcc
atcgagtgggcctgcttggtggtggatgaagcacacaggctgaagaacaaccagtccaaa
ttctttagggtattaaacagctacaagatcgactacaagctgctgctcactggcacccca
ctccagaacaacctggaagagcttttccacctgctcaacttcctgactcctgagaggttt
aataacctggagggcttcctggaggagtttgcagacatctccaaggaggaccagatcaag
aagctccacgacctgctggggccccacatgctgcggcggctcaaggccgacgtgttcaag
aacatgccggccaagaccgagctgatcgtcagggtggagctgagccagatgcagaagaag
tactacaagttcatcctgacacgcaactttgaagccctgaactccaaaggtggagggaac
caggtgtccctgctcaacatcatgatggacctgaagaagtgctgcaaccacccctacctc
ttcccggtggcagctgtggaggccccggttctccccaacggatcctacgatggcaattct
ctggtcaagtcttctgggaagctgatgctgctccaaaagatgctgaagaagctacgggat
gggggccacagagttctgatcttctcccagatgacgaagatgctggacctgctggaggac
ttcctggagtacgaaggctacaagtacgagcggatcgacggcggcatcacgggcggcctg
cgccaggaggccatagacaggtttaatgctcctggtgctcagcagttctgcttcctcctc
tccacccgtgctgggggcctgggcatcaaccttgctacggccgacacggtcatcatctac
gactctgactggaacccccacaatgacatccaggcgttcagcagagctcaccgcatcggg
cagaacaagaaggtgatgatctaccgcttcgtgaccagagcctcggtggaggagaggatc
acgcaggtggccaagaggaagatgatgctcacacacctggtggtgcgcccggggctgggc
tccaagtcaggctccatgaccaagcaggagcttgatgacatcctcaagtttgggacggaa
gagctcttcaaggatgatgtggagggcatggtgcaggggcagaggctcggtgtgccagat
gctgtcacccctttccccgaccctctgtcggccaaagggggagcagtgacccctggcatg
aagaagaagcacggcggcaccccgccaggggacaacaaggaggtggaggacagcagtgtg
atccactacgacgacgctgccatctccaagctgctggaccgcaaccaggacgcgacggat
gactcggagctgcagaacatgaacgagtatctcagctcctttaaagtggctcagtatgtt
gtgagagaagaggacggtgtggaggaagtggagcgtgagatcatcaagcaagaggagaat
gtggaccctgactactgggagaagctgctgcggcaccactacgagcagcagcaggaggac
ctggccaggaacctggggaaggggaagagaatccgcaagcaggtgaactacaacgacacc
tcccaggaggaccaagagtggcaggatgagctctctgacaaccagtcagagtactccatt
ggctctgaggatgaggatgaagactttgaggagaggccagaaggtcagagtggcaggagg
cagtcccggcggcagctgaagagcgacaggggccctctggcccctgtgttggggttcaac
accaggcagcgcaaggccttcctgaacgccatcatgcgctggggaatgcctccccaggac
gccttcaactcccactggctggtgcgggacctgcggggcaagagcgagaaggagttcagg
gcctatgtctcgctcttcatgaggcatctgtgtgagccgggggcggacggcgctgagacc
ttcgcggacggcgtcccccgcgaggggctgtcgcgccagcacgtcctgacccgcatcggg
gtcatgtcgctcgtcaggaagaaggtgcaggagtttgagcatgtcaacggcaagtacagc
accccagatgtgatcctcgagggcccagagagcaggaagggcagtgaggtggtgtcttca
gaccccaacacccctgtcccggccagcccagcacacctgcacgtgggacctgcagccctg
gcagacaaagcagaaacacaagtggggctccaggaggagaaggaccaagtggagcagaag
cccaggaaggcatctgacagccaggtgcctgcaagtgctgagaaggtggagagtgcagag
tacccagaaggctgtgacagcaaggagaagccgagggaagagaggcaagaggagagtgaa
aaggctgagccctctcctgagcccctgggcaaagatgaaggtattccagagaaagagaag
cctttggagaagctggagttgagcagcagcccaggcaaaggggaggacagggaagccaaa
ccagaggaggccaaggcagaggagaaggaacagagtgaggctcagcaaaatggtgacaaa
gaggaagaggaggatggaaagaaggatgagaggaacatcaacttccgcttcatgttcaac
attgctgacggtggcttcacagctcttcccttgacgctcccccgcgccagccatggctat
gcccgctggcaggacatccagaacgaccctcgctacggcatcctgaacgagcccttcaag
tccgaggtccacaagggcaactacctggagatgaagaacaagttcctcgcccggcgcttc
aagttgctggagcaggccctggtgatcgaggagcagctgcggagggctgcgtacctcaac
atgacccaagaccccaaccccccggccatggccctgaacgcgcggctggcggaggtggag
tgcctggcagagagccaccagcacctctccaaagagtccctggctggcaacaagcctgcc
aacgccgtcctgcacaaggtgctgaaccagctggaggagctgctgagcgacatgaaggcc
gacgtgacccggctgccctccatgctctctcgcatcccgcccgtggccgcccgcctacag
atgtccgagcggagcatcctcagccgcctggccacgcgtggcggggaccccaccggcccc
cagggctccttcggctcctcccagatctacaacagcagcttcggggcgagtttccgcggc
cccgggccgggcgggatcgtcaactacagccagatgcctctgggaccatacgtgaccgat
atttag
DBGET
integrated database retrieval system
