Dryobates pubescens (Downy woodpecker): 104310135
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Entry
104310135 CDS
T08526
Symbol
RHBDL3
Name
(RefSeq) rhomboid-related protein 3
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpub01002
]
104310135 (RHBDL3)
Enzymes [BR:
dpub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
104310135 (RHBDL3)
Peptidases and inhibitors [BR:
dpub01002
]
Serine peptidases
Family S54: Rhomboid family
104310135 (RHBDL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_8
EF-hand_11
AIF-1
EF-hand_9
EF-hand_4
DUF3087
Motif
Other DBs
NCBI-GeneID:
104310135
NCBI-ProteinID:
XP_009909844
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MDLGSFEKLKNTGSDCPGIKESSKHFPLLSQFDPDNTGYISTEKFRSLLQRHGSELDPHK
LEVLLALADSNSEGRICYQDFINLMSNKRSNSFRQAILQGNRRLCSKALLEETGLSLSQR
LIRHVAYETLPREIDRKWYYDSYTCCPPPWFMITITIVEVAFFLYNGVVLDRFVLQVSHP
LYLKNALVYHPQLRAQAWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGAARISFVY
VAGVVAGSLAVSVADMTAPVVGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVALIC
MSFEFGRAVWLRFHPSAYPPCPHPSFMAHLGGVMVGITLGVIILRNYEQRLQDQTLWWIF
LSIYVIFVLFAIFWNIFAYSLLDLKLPPPP
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggatcttggttcctttgagaaactgaaaaacactggcagtgactgtcctgggattaaa
gagtctagcaagcactttcccctcctgtcccagttcgatcccgacaacaccggctacatc
agcactgagaagtttcgctcccttctccagagacacggctcagagctggacccccacaag
ctggaggtcctgctggccctggcagacagcaactctgaagggaggatctgctaccaagac
ttcatcaacctgatgagcaacaaaaggtcaaacagcttccgccaggccatcctgcagggc
aacaggaggctgtgcagcaaggcactgctggaggagacagggctgagcctctcgcagagg
ctgatccggcacgtggcctacgagaccctgccgcgagagatcgaccgcaagtggtactat
gacagctacacttgctgccccccgccctggttcatgatcaccatcactattgtggaggtt
gccttttttctttacaatggagtggtattggacagatttgtgctgcaagtcagccatccc
ttgtatctgaagaatgcattggtttaccatcctcagctccgtgctcaggcttggaggtac
ctaacctacatattcatgcatgcagggatagaacatcttggactcaatgttgtccttcag
ctcttggttggggttcctctggaaatggtgcatggagctgcgaggatcagctttgtgtac
gttgctggagttgtggcagggtccctggcagtgtcagtagctgatatgactgcacctgtg
gtgggctcctctggaggtgtgtacgcccttgtctcagctcacttggccaatatagtcatg
aactggtcgggaatgaagtgccaattcaaactgctgcgcatggctgttgccttgatctgt
atgagctttgaatttggaagagctgtgtggctgcggttccacccctccgcctacccacca
tgcccccaccccagcttcatggctcacctgggaggagtgatggttggaatcacccttggt
gtcatcatcctgaggaactatgagcagagactccaagatcagactttatggtggattttc
ctttctatttatgtaatttttgtcctgtttgccatcttctggaatatttttgcctacagc
ctgttggatctaaagctacctccccctccttga
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