KEGG   Dryobates pubescens (Downy woodpecker): 104310214
Entry
104310214         CDS       T08526                                 
Symbol
KDM5A
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dpub01009]
    104310214 (KDM5A)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dpub03036]
    104310214 (KDM5A)
Enzymes [BR:dpub01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     104310214 (KDM5A)
Protein phosphatases and associated proteins [BR:dpub01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104310214 (KDM5A)
Chromosome and associated proteins [BR:dpub03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104310214 (KDM5A)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 PHD_5 PHD_4 PHD_2 PHD_ash2p_like
Other DBs
NCBI-GeneID: 104310214
NCBI-ProteinID: XP_009909928
LinkDB
Position
Unknown
AA seq 1610 aa
MTRVKLDFLDQLAKFWELQGSNLKIPVVERKILDLYGLSKIVASKGGFEVVTKEKKWSKV
ASRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMGIQKPNLDLKEKVEVEELSSDAQ
VSPKQASRMNVVLKRTRRVKSQAEAGEMSRNTELKKLQIFGAGPKMMGLALGAKDKEDEV
TRRRKGSRSEAFGMQMRQRKGTLAVNFVDLYVCLFCGRGNNEDKLLLCDGCDDSYHTFCL
IPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVREYTLQSFGEMADNFKSDYFNMPVH
MVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKLMPEEEDYALSGW
NLNNMPILEQSVLAHINADISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTW
YGVPSHAAEQLEDVMKELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFV
VTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVSHYRRLGRHCVFSHEELIFKMAAD
PECLDVGLAAMVCKEMTLMIEEETRLRESVVQMGVLMSEEEVFELVPDDERQCTACRTTC
FLSALTCSCNPERLVCLYHPSDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWV
SRVTEALSANLNHKKDVIELRVMLEDAEDRKYPENDLFRRLRDAVKEAETCASVAQLLLS
KKQKHSRQSQDSGRTRTKLTMEELKAFVQQLFSLPCIISQARQVKNLLDDVEEFHERAQE
AMMDEIPDSSKLQELIDMGSGLYVELPELPRLKQELQQARWLDEVRSTLLDPQRVTLDVM
KKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQARPRQSMMALEGIVSEAK
NIPAYLPNVLALKEALQRARDWTAKVEAIQNGNNYAYLEQLESLSAKGRPIPVRLDALPQ
LESQVAAARAWRERTGRTFLKKNSSYSLLQVLSPRTDIGVYGSSKNRRKRVKELMEKEKE
KDLDLESLSELEDGLEEARDTAAVVAVFKEREQKEIEAMHALRAANLAKMTMVDRIEEVK
FCICRKTASGFMLQCELCKDWFHSGCVPLPKTTAQKKGSSWQAKEVKFLCPLCMRSRRPR
LETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRARQALATEELSSALAKLSVLSQR
MVEQAAREKTEKIISAELQKAAANPDLQGHLTSFQQSAFNRVIGSVSSSPQQTLDYDDEE
TDSDEDIRETYGYDIKDNASVKSSSSLEPNLFCDEEIPIKSEEVVTHMWTAPSFCAEHAY
SSASKSCSQGSGTPRKQPRKSPLVPRSLEPPVLELSPGAKAQLEDLMMVGDLLEVSLDET
QHIWRILQATHPPSEDRFLHVMEDDSMDEKPLKMRGRDSSERKKKRKLERAEQFFGDMKQ
KSKELKKLEKPKKKKLKLSIDKTKEMNKLAKKLAKEEERKKKREKAVVTKVELAKESTEK
KREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVG
VSPEMAENEDYICINCAKKPLQGQSSPAHAPPPPFLLSYKLPMEDLKETS
NT seq 4833 nt   +upstreamnt  +downstreamnt
atgacaagagtgaagctggacttcttggatcagttagcaaaattttgggaactccaagga
tccaatttaaaaatccctgttgtggagagaaaaatactggatctgtatgggctgagcaag
attgttgccagcaaaggaggctttgaagtagttactaaggagaagaaatggtctaaagtg
gcgagtcgacttggctacctgccaggaaaaggcacggggtcgctgctcaagtctcactat
gaacgaatcctctacccctatgagctcttccagtctggggtcagccttatgggcatccaa
aagccaaacttggaccttaaggaaaaagtggaggttgaggagctcagctcagatgcccag
gtgtccccaaagcaggcttcaagaatgaacgttgtgctgaagagaaccaggcgcgtcaaa
tcccaggcggaggctggagaaatgagtaggaatactgaactgaagaagctgcagatcttt
ggagctggacccaagatgatggggctggcgttgggagcaaaggataaagaggatgaggtg
acgaggaggcgcaagggcagcaggtcggaagcgttcgggatgcagatgaggcagcgcaag
gggacccttgccgtcaacttcgtcgatctgtatgtttgcttattctgtggcagaggaaat
aacgaggacaaactgctgctctgtgatggatgtgatgacagctaccacactttctgcttg
attcctcctttacctgacgtacccaagggggactggaggtgtcccaagtgcgttgctgag
gagtgcaacaaaccccgggaggcctttggatttgaacaagctgtcagggaatacactctc
cagagctttggtgaaatggctgataacttcaagtctgactatttcaacatgccagtccat
atggttcccaccgagcttgtggagaaggagttctggcgcttggtgagcagcatagaggaa
gatgtcatcgtggagtacggagccgacatctcctccaaggacttcggaagtggcttccca
gtgaaggatggccgacgaaagctgatgccagaggaggaggattatgcactttctggctgg
aacttgaacaacatgccaattctagagcaatcagtgcttgctcacatcaatgcagatatc
tctggcatgaaggtgccttggctgtacgtggggatgtgcttctcctcgttttgctggcac
attgaagatcactggagctattccatcaactacctgcactggggagagccaaagacgtgg
tacggcgtgccgtcccatgccgcggagcagctggaagacgtgatgaaggagttggctcct
gagctgtttgaatcccagcctgatctcctgcatcagctggtcactattatgaaccccaac
gtgctgatggaacacggtgtcccagtgtacaggaccaatcagtgtgccggcgagttcgtt
gtgaccttccctcgtgcctatcactcaggatttaaccagggatacaactttgctgaagct
gtgaacttctgcactgccgactggctccccattggacgtcagtgtgtgagtcactaccga
aggctgggccgtcactgtgtgttctcccatgaagagctgatcttcaagatggctgcagat
ccagagtgcctggatgttgggctggctgccatggtctgcaaggagatgactctaatgata
gaggaagaaacacggctgagggagtctgtggtacagatgggagtgttgatgtctgaagaa
gaggtgtttgagctggtcccagacgatgagcggcagtgcacagcgtgcagaaccacgtgc
ttcttgtcagctcttacatgctcctgtaatcctgagcgtctggtatgcttgtaccatcca
tctgatttatgtccatgtcccatgcagaagaagtgtctaaggtaccgctatccactggaa
gatcttccttctttgctgtatggagtgaaagttagagcacagtcttacgacacttgggtc
agtagggttacagaggctctgtctgccaacctcaaccacaagaaagatgtgattgagctg
agagtgatgttggaggatgctgaagacaggaagtatccggagaatgatctgttccgcagg
ctcagggatgctgtgaaagaagcagagacctgcgcttcggtagcacagctgcttctgagc
aagaagcagaagcacagcagacagagccaagatagcggaaggacacgcaccaagctgaca
atggaggagcttaaagcctttgtgcagcagctgttcagcttgccctgcattatcagccag
gcccgacaagtaaagaatctgcttgatgacgtggaagaatttcatgagcgtgctcaagaa
gcgatgatggacgagatcccagactcctccaagctgcaggagctgatagacatgggctct
ggcctttatgtagagcttcctgaactgccaaggctgaagcaggaactgcagcaggcaagg
tggctggatgaggtgaggtctaccctcttggatccccagagggtcaccctggatgtgatg
aagaagctgattgactctggtgtgggcttggcaccacaccacgctgtagagaaagccatg
gctgagctgcaggagctgctaacagtctcggagaggtgggaggagaaggccaaggtctgc
ctgcaggccagacctcgccaaagtatgatggctctggagggcatcgtcagtgaagccaag
aacatccctgcttacctgcccaatgtgctggcgctgaaagaagccctgcagcgggctaga
gactggactgccaaagtggaggccatccagaatgggaacaactatgcctacctggagcag
ctggagagcttgtctgccaagggccggcccatcccggtgcgcctggacgccctgccccag
ctggagtcccaggtggctgctgcacgtgcctggagggagcgcacaggaaggaccttcctg
aagaagaactccagttacagtctgctgcaggtcctgagccctcggactgacattggtgtt
tatgggagcagcaagaacaggcggaagagggtgaaggagttgatggagaaggaaaaggag
aaagatcttgacctggaatccctaagtgaactggaggatgggctggaggaggccagggac
actgcagctgtggtggctgtgttcaaggagcgggaacagaaggagattgaagccatgcac
gcgctcagggcagctaacctggccaagatgaccatggtggatcggatcgaggaggtcaag
ttctgtatctgccgcaaaacggccagcgggttcatgctgcagtgcgagctgtgcaaggac
tggttccacagcggctgcgtgcccctgcccaagaccactgcccagaagaaaggctccagc
tggcaggccaaggaggtgaagttcctgtgcccgctttgcatgcggtcccggaggccgcgg
ctggagaccatcctgtccctgctggtgtccctgcagaagctgccggtgcggctgcccgag
ggggaggcgctgcagtgcctgaccgagcgcgccatgagctggcaggaccgcgcgcggcag
gcgctggccaccgaggagctctcctcggctctggccaagctctccgtgctcagccagcgc
atggtggagcaggcggcgcgcgagaagacggagaagatcatcagtgcagagctgcagaaa
gcagcagcaaacccagacctgcagggacacttaacgagtttccagcagtcagcctttaac
agagtgataggcagtgtgtcctcatcccctcagcagaccttggattatgatgatgaagag
acagactctgacgaagacatcagggagacctatggctacgacatcaaggacaatgccagt
gtgaaatcttcgagcagcttggagcccaatctgttctgtgatgaggagatccctattaaa
tcagaggaagtggtgacacacatgtggactgctccctcattctgtgctgaacatgcatat
tcatctgcttctaaaagctgctctcaaggctctggcacgccaaggaagcagcctcgcaag
agtcccctggtacctcgcagtttggagccccctgtgctggagctgtcacctggagccaaa
gctcagctagaagatctaatgatggtaggagatctgctagaggtgtcactggatgagact
cagcatatctggaggattttacaggctactcacccaccctctgaggacaggttccttcat
gtcatggaggatgacagcatggatgagaagccactcaaaatgagagggagagactcttct
gagaggaagaagaaacgaaagctggagagagcagagcagttctttggagacatgaagcaa
aaatctaaggagctgaaaaaactggaaaaacccaagaagaagaagctaaaactcagcata
gataagacaaaggagatgaacaagctggcaaagaaactggcgaaggaggaggagcggaag
aagaagcgggagaaggcagtcgtcacgaaggtggagctagcgaaagagagcacagagaaa
aaaagagagaagaaggttctagatattccctccaagtatgactggtcaggagcagaggag
tcagatgatgagaacgccgtctgtgctgcgcagaactgccagaggccctgcaaggataag
gtggactgggtgcagtgtgacggtggctgtgatgagtggttccatcaggtctgtgtgggg
gtctctccagaaatggcagagaatgaggattacatctgtataaactgtgcaaagaagccc
ctgcagggacagagcagccctgctcatgcaccgccccctcctttcttactgagctacaaa
ctacccatggaagatctgaaggagacaagttag

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