Dryobates pubescens (Downy woodpecker): 104310232
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Entry
104310232 CDS
T08526
Symbol
DCP1B
Name
(RefSeq) LOW QUALITY PROTEIN: mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104310232 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104310232 (DCP1B)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104310232 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
104310232 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
104310232
NCBI-ProteinID:
XP_009909947
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MESPSAVQIAATGAECMQNTVGEKTDVEGTLFVYTRSASPRHGFTIMNRLSMENRTEPIT
KDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAELMKNLTQQEQFKAQQGTGTGVSP
MLLNSANNKEVDILRMLTKAKDEYTKCKTCSEPKQITSSSAIYNNPNLIKPIPVKPSENQ
HQRVPQQSKNVDPEPQHLSLTALFGKQEKPGGSEPLKKQHQENLPVRQGVVRSLSYEEPS
RHSPSAEKQLCPAIQKLMVRGTELQPLAELPERRLCANGSGHPAGQPFTGLFQPVASHAV
ASPHVVQDPAGTQNLLQKLQGQAGSVTKMEAGATGAVNSTAAVFSTSPAAAAGALEAAVN
TRGQPPLVYFNGSLPAQTLESQTLGKEQSKLPRQPLALPGNQAAGSGVISPQELLKKLQV
VQQEQQLHVSSRPTLAAKFPVVPQTSSTLKPLDSWMDKAPGAEKQSALFQVISPQRIPAT
VTPTLLMSPMVFTQPSPAPPKAGEGGRLAAASQEPXASLLLPLQSPEPAAASSTSVTKMQ
LQETLLHLIQHDDNFLNIIYEAYLFSARKAAVKKAL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggagagcccctctgccgttcagatagccgccacaggagcagaatgcatgcaaaacacc
gttggagagaagactgatgtggagggaacgctgtttgtttacacaaggtcagcctctcca
aggcatggcttcaccattatgaacagactgagcatggaaaatcggacagaacctattact
aaagacctggatttccagctgcaggacccttttctactgtacagaaatgccagattgtcc
atctatgggatctggttttatgataaggaagaatgccaaagaattgcagagctcatgaaa
aacctaactcaacaggaacaattcaaagcccagcagggcacaggaactggagtgtcccct
atgctcctgaactctgctaacaacaaagaagtggatatcttgcggatgcttaccaaggcc
aaagatgaatacaccaagtgtaagacctgctcagagccaaaacaaataaccagctcttct
gcaatctataacaaccctaacctaatcaaaccaattccagtgaagcccagtgaaaatcag
catcaacgagtacctcagcagagcaagaacgtggatcctgagccgcagcacttgtctttg
acagcactgtttggcaagcaggaaaagccaggtggctcagaaccgctaaagaagcagcac
caagagaatcttcctgttaggcagggggtggtacgttccctgtcctacgaggagcccagc
aggcattctccctctgcagagaagcagctctgccctgccattcagaagctgatggtgcgt
gggacagagctgcagcccctggcggagctgcccgagcgccggctctgcgcgaacggcagc
ggccaccccgcggggcagcctttcactggactcttccagcccgtggcttctcacgccgtt
gcatcgccccacgtcgtccaggatcctgctggcacccagaacttgttgcagaaactgcag
ggtcaggctgggtcagtgactaaaatggaggctggtgcaacaggagctgtgaactcaacc
gctgctgtgttcagcacttctcccgctgctgctgctggagctctggaggcagcagtcaat
accaggggccagccacccctggtgtacttcaatggttccttaccagcccagaccttagag
tctcagacactcggtaaagaacaatccaaacttcctaggcagccacttgctctccctggc
aaccaagcggctgggtccggagtgatttcacctcaggagttactgaagaaactgcaggtg
gtgcagcaagagcaacagttgcacgtatccagcagaccaaccctggcagctaagtttcct
gttgttcctcagaccagcagcacgctgaagccactggattcctggatggacaaggccccc
ggggcagaaaaacagagtgctctgtttcaggtcatctcgcctcaacgcatccctgccacc
gtcactcctaccttactgatgtcccccatggtcttcactcagcccagccctgccccgcca
aaagccggcgaaggtgggcggctggcggcggccagccaggagcctngcgccagcctgctc
ctgccgctgcagagcccagagcccgctgcggccagcagcacctcggtgaccaagatgcag
ctgcaggaaacgctgcttcatctgatccagcacgatgacaacttcctgaacatcatctac
gaagcgtatctcttcagcgccaggaaggcggcggtgaagaaggctctctga
DBGET
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