Devosia polycyclovorans: ACE4RL_01030
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Entry
ACE4RL_01030 CDS
T11232
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dpv Devosia polycyclovorans
Brite
KEGG Orthology (KO) [BR:
dpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpv03016
]
ACE4RL_01030 (truB)
Enzymes [BR:
dpv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACE4RL_01030 (truB)
Transfer RNA biogenesis [BR:
dpv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACE4RL_01030 (truB)
Prokaryotic type
ACE4RL_01030 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XHD29295
LinkDB
All DBs
Position
219345..220259
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AA seq
304 aa
AA seq
DB search
MSLNQPKSKKRAISGWVVLNKPYDFTSTQAVGKVRWLLNAAKAGHAGTLDPLATGILPIA
LGEATKAVPQVQDGIKVYRFTIGWGKATTTDDTEGEVVATSDVRPEQGALEAVLPRFTGT
IMQRPPAFSAIKVDGERAYDLARAGETVELAERPIDVDAIELVSHSPEESVLEVTCGKGT
YVRALARDIAEALGTVGHVTRLHRAAVGPFTDDDAVSIEELEAAEAGEARDGLLLPVSAG
LEDIEEIRLDAGQAKAVSHGNAVLLTGANAPVSVDECWVSFKGKVLATGHVEFGQFKPGR
VFNL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ctgagtttgaaccagccaaaatcgaaaaagcgcgccatttccggatgggtcgtgctcaac
aagccatatgacttcacctccacccaggcggtgggcaaggtgcgctggctgctgaacgcc
gccaaggcgggccatgccgggacgctcgacccgctggccaccggcatattgcccattgcg
ctgggcgaggccaccaaggcggtgccgcaggtgcaggacggcatcaaggtttatcgattc
accattggctggggcaaagccaccaccactgatgacaccgagggcgaggtggttgccacc
tccgatgtgcggcccgaacagggcgcgcttgaggccgtgctgccgcgctttaccgggacc
atcatgcagcggccaccggccttttcggccatcaaggtagatggcgagcgcgcctatgat
ttggcgcgggccggcgagacggtggaactggcagaacgccccatcgatgtcgacgcgatc
gaactggtgtcgcacagccccgaggaaagcgttcttgaggtcacctgtggcaagggtacc
tatgtgcgggcgctggcgcgcgacattgccgaggcgctgggcacggtgggccatgtgacc
aggctgcaccgcgccgcggttggtccgtttaccgatgacgacgcggtgagcatcgaagaa
ctcgaagccgccgaggccggggaggcgcgcgatgggttgctgctgccggtttcagccggc
cttgaggacatcgaggaaatccggctcgatgccgggcaggccaaggcggtgagccatggc
aatgccgtgctgctgaccggagccaatgcaccggtgtcggtggacgagtgctgggtgagc
ttcaagggcaaggtgctggcgaccgggcatgtggaattcggccagttcaaacccggccgg
gtgttcaatctttag
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