KEGG   Devosia polycyclovorans: ACE4RL_05565
Entry
ACE4RL_05565      CDS       T11232                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
dpv  Devosia polycyclovorans
Brite
KEGG Orthology (KO) [BR:dpv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpv03021]
    ACE4RL_05565 (rpoH)
Transcription machinery [BR:dpv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ACE4RL_05565 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_11 GST_C_7 GvpK Sigma70_r4_2
Other DBs
NCBI-ProteinID: XHD28584
LinkDB
Position
complement(1083582..1084448)
AA seq 288 aa
MAQTNLPVLSSDGGLSRYLQEIRKFPMLEADEEYMLAKRYKEHADPGAAQKLITSHLRLV
AKIAMGYRGYGLPISEVISEGNVGLMHAVKRFEPEKGFRLATYAMWWIRAAIQEYVLRSW
SLVKIGTTAAQKRLFFNLRKVKGQIAALDDGTLHPEQIKQIATTLNVTEDEVVQMNSRLS
GDASLNSPMRADEGSSEWQDWLVDDTPDQETSLGESEEYSERMGMLNKAMDVLNERERAI
FQARRLQESPSTLEELAQQYEVSRERIRQIEVRAFEKVQEAVKEAAGS
NT seq 867 nt   +upstreamnt  +downstreamnt
atggcccaaacgaatttgccggtcctctcgtccgatgggggcctcagccgctatcttcag
gaaatccgcaagtttcctatgctggaagcggatgaagaatacatgctggccaagcgctat
aaagagcacgccgatcccggcgcagcgcaaaagctcatcactagccatttgcgtctcgtg
gccaagatcgccatgggctatcgtggctatggcctgcccatttccgaggtcatctcggag
ggcaatgtcgggctgatgcatgcggtcaagcgcttcgagccggaaaaaggcttccgcctg
gcgacttacgccatgtggtggattcgcgcggccatccaggaatatgtgctgcgctcctgg
agcctggtcaagatcggcaccaccgcggcccagaagcgactgttcttcaacctcaggaag
gtgaagggccagatcgccgcactggatgacggtacgctccaccccgagcagattaagcag
atcgccaccaccctcaatgtgaccgaggacgaagtggtgcagatgaattcgcgcctgtcg
ggtgacgcgtcgctcaattcccccatgcgggccgacgaaggttcgtctgaatggcaggac
tggttggtcgacgacacgcccgaccaggagaccagcctgggcgaaagcgaggaatactcc
gagcgcatgggcatgctgaacaaggcgatggatgtgctcaatgagcgcgaacgcgccatt
ttccaggcccggcgcctgcaggaaagcccatcgaccctcgaggagctggcccagcaatat
gaggtcagccgcgaacgcatccgccagatcgaagtccgcgcctttgaaaaggtgcaggaa
gcggtgaaggaagcggcagggtcctag

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