Devosia polycyclovorans: ACE4RL_11335
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Entry
ACE4RL_11335 CDS
T11232
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dpv Devosia polycyclovorans
Brite
KEGG Orthology (KO) [BR:
dpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpv03009
]
ACE4RL_11335 (rimO)
Enzymes [BR:
dpv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACE4RL_11335 (rimO)
Ribosome biogenesis [BR:
dpv03009
]
Prokaryotic type
ribosomal protein modification factors
ACE4RL_11335 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XHD26241
LinkDB
All DBs
Position
complement(2256333..2257658)
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AA seq
441 aa
AA seq
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MTQAPKIGLVSLGCPKALVDSERIMTTLRAQGYSFSRDYAGADVVLVNTCGFLDSAKQES
LEAIGEALNENGKVIVTGCLGVEENLIRETHPSVLAITGPHQYESVVSAVHDHLPPVPNK
FVDLVPESGLKLTPRHYAYLKISEGCNNRCSFCIIPQIRGDLASRPAAGILSEAEGLIRS
GVKELLVISQDTSAYGLDIKYATSKYRGREVKAKFYDLAKELGELGAWVRLHYVYPYPHV
DPVMELMAEGLVLPYLDIPFQHASPNVLKAMRRPAHQEKTLNRILDWKRQVPDLTVRSNF
IVGFPGETEEDFEMLLDFIEEAEIDRAGCFKYEPVTGATANELDGVVPDEVKEERFAQLM
EVAQNVSFGQLQKKVGRTIDVIVDDVRPEQNRVIARSKWDAPEIDGQVIVDQADGIKIGD
IVSVTVTDNDEYDLFAVPAPV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggcgcccaaaatcgggctcgtcagcctcggctgccccaaggctctcgtagac
agcgagcgcataatgaccaccctgcgcgcgcagggctactccttcagccgcgattatgcc
ggggccgatgtcgtgctggtcaacacctgcggcttcctcgacagtgccaagcaggagagc
cttgaggccattggcgaagcgctcaatgaaaacggcaaggtcatcgttaccggttgcctc
ggcgtcgaggagaatctgatccgcgagacgcatccttcggtcctcgccatcacgggcccg
catcaatatgaaagcgtggtttcggcggtgcatgatcacctgccgcccgtgccgaacaaa
ttcgtcgacctggttcccgagagcgggctcaagctcactccgcggcactacgcctatctc
aagatttccgaaggctgcaacaaccgttgctccttctgcatcattccccagattcgcggt
gacctggcctcgcgcccggcagccggtatcctctcggaagccgaggggctcattcgttca
ggcgtcaaggagttgctggtcatctcgcaggacaccagcgcctacggcctcgacatcaaa
tatgcgacgtcgaaatatcggggccgcgaggtcaaggccaagttctacgacctggccaag
gaactgggcgaactgggcgcctgggtgcgcctgcactatgtctatccctacccccatgtc
gatccggtcatggaactgatggcggaaggcctcgtcctgccctatctcgacattcccttc
cagcacgcttccccgaacgtcttgaaggccatgcgccgtcccgcgcatcaggaaaagacg
ctcaaccgcatcctcgactggaagcgccaggttcccgacctcaccgtgcgctcaaacttc
atcgtcggtttccccggcgagaccgaggaagatttcgaaatgctgctcgatttcatcgag
gaggccgaaatcgaccgggccggctgcttcaaatatgagcccgtcaccggcgccaccgcc
aacgaactcgacggcgtcgtgcccgacgaggtcaaggaagagcgctttgcccagttgatg
gaagtggcgcagaacgtttccttcggtcagttgcagaagaaggtcggccgtaccatcgac
gtcatcgttgacgacgtccgccccgagcagaaccgcgtcatcgcccgttccaaatgggac
gcgcccgagatcgatggtcaggtcattgtcgaccaggcagacggcataaagatcggggac
atcgtctcggtcaccgtcaccgacaacgacgagtacgatctcttcgcggtgccagcccct
gtctga
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