Devosia polycyclovorans: ACE4RL_12445
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Entry
ACE4RL_12445 CDS
T11232
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dpv Devosia polycyclovorans
Pathway
dpv03030
DNA replication
dpv03430
Mismatch repair
dpv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACE4RL_12445 (dnaE)
03430 Mismatch repair
ACE4RL_12445 (dnaE)
03440 Homologous recombination
ACE4RL_12445 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpv03032
]
ACE4RL_12445 (dnaE)
03400 DNA repair and recombination proteins [BR:
dpv03400
]
ACE4RL_12445 (dnaE)
Enzymes [BR:
dpv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACE4RL_12445 (dnaE)
DNA replication proteins [BR:
dpv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACE4RL_12445 (dnaE)
DNA repair and recombination proteins [BR:
dpv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACE4RL_12445 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH
HHH_3
DUF655
Amidohydro_1
Motif
Other DBs
NCBI-ProteinID:
XHD26451
LinkDB
All DBs
Position
complement(2484957..2488412)
Genome browser
AA seq
1151 aa
AA seq
DB search
MRGPGFIHLHVHSAFSLLEGALQLETILKLAAEDEQPALGIADTNNLFGALEFSEKATKK
GIQPLIGVELAVDFAAAEERVSERGHTAWTGKSSIVLMAQTEEGFSNLSQLVSRAYLEGE
DGLARARLDWMTRESLSGLICLSGGPEGAVDMAFANGQDANAVRRLDRLADLFGDRFYVE
LQRHGRPMEATVEPRLVDYAYRKGIPLVATNEPFFKTEKEYEAHDALLAIAGGSVLAQTE
RRKLNDQYYFKTRAEMVDLFSDLPEALDSTVEIARRVAFRPRTRGPILPKFAAGSHATEE
EVVAAEAAALRKIAVDGLDKRLETVGLAPGKEEKEYRERLDFELGIIENMKFPGYFLIVA
DFIQWAKAHNIPVGPGRGSGAGSLVAYATTITDLDPLRYNLLFERFLNPERVSMPDFDID
FCQDRREEVIDYVQDKYGASQVAQIITFGTLQARAVLRDVGRVLQMPYGQVDRICKLVPA
NPADPWSVERTMNEVPQFKQMADEDETVGQLVEIAKALEGLFRHASTHAAGIVIGDRPLQ
ELLPLYRDPRSDMPVTQYNLKWVEPAGLVKFDFLGLKTLTTIRYAVDMVKQRGIELDIDA
IDIEDAATYKLYARGDTYGIFQFESAGMRRALMDLKPDRIEDLIAMNALYRPGPMDNIPS
FINRKHGTEEVVYPHPALSEVLDETYGIIVYQEQVMQIAQLLSGYSLGEADMLRRAMGKK
IKAEMDNQRIRFREGAGPNGVSEALADEIFDLLAKFANYGFNKSHAAAYAWVSYQTAYLK
EHFPHEFYAASMTLDMAQTDKLSDFRREAGKKGIEVVPPCVNQSEVLFSVKNDRVHYGLS
AVKGVGRAMAEHIVEVRGDQPFKDLGDFARRVDPRVLNKRTLETLVNAGAFDCLVPRREI
AFAAVESVIGTAQALTADRSSGQVSLFGGVEEEPFRLPTGVAVWNSTERADRELSAIGFH
LSAHPLDAYADLFEKLRVQRWSDFERAVKDGAGAGRLAGTISSRNDRRTRKGTPMMILTL
SDQSGTYECIAFSEQINEFGAILQPGNSVILQVGADERAEGISVRLMSAEPIEGMAERID
RQLTVFLADPKALGPTSAQLKRGGNGTVNFVVIRDGGAREYEIELPGKYNVTAEVAGGIK
ALDGVTDVRFA
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcccaggcttcattcaccttcatgttcactctgccttctcgcttctcgaaggc
gccttgcagctggagaccattctcaagctcgccgcggaggatgaacaaccggctctcggt
atagccgacaccaacaatctcttcggcgccctcgaattctccgagaaggccaccaagaag
ggcattcagccgctgatcggcgttgagcttgccgtcgatttcgctgccgccgaggagcgg
gtcagcgaaaggggccacaccgcctggaccggcaagtcctccattgtcctcatggcccag
acggaggagggtttttccaacctctcgcagctcgtctcccgcgcttacctcgaaggcgag
gacgggctggcgcgggcaaggctggattggatgacccgcgaaagcctttcgggcctgatc
tgcctctccggcggtcccgaaggagccgtcgatatggcttttgccaatggccaggatgca
aatgctgtccgccgcctggatcgcctggccgacctcttcggtgaccgcttctatgtcgaa
ttgcaacgccacggccggcccatggaggcgacggttgagccgcgcctggtcgactacgcc
tatcgcaagggcatccccctggtcgccaccaatgaacccttcttcaagaccgaaaaggaa
tatgaggcgcatgacgccttgctggccatagccggcggctccgtgctggctcagacggag
cgccgcaagctcaacgatcagtattatttcaagacccgcgcggagatggtcgacctgttc
tccgacttacccgaggccctcgattcgaccgtcgagatcgccaggcgcgtggccttccgc
ccgcgcacccgcgggcccatcctgccaaaatttgctgcgggctcacacgccaccgaagaa
gaagtggttgccgctgaagccgccgcgctgcgcaagatcgctgtggacggtctcgacaag
cgccttgaaaccgtaggcctggcgccgggcaaggaagaaaaggaatatcgcgagcgcctc
gatttcgagctgggcatcatcgaaaacatgaagttccccggctacttcctgatcgtggcc
gacttcattcaatgggccaaggcccacaatatcccggtcggaccggggcgtggttcgggc
gccggctctctggtcgcctatgccaccaccatcaccgacctcgacccccttcgttacaat
ctgctgttcgagcgctttctcaatccagaacgcgtctcgatgccggactttgatatcgac
ttctgccaggaccggcgcgaggaagtcatcgactacgtgcaggacaagtacggcgccagc
caggttgcccagatcatcacctttggaacgctgcaggcccgcgccgtgctgcgcgacgtc
ggccgggtgctgcaaatgccctatggccaggtggaccgcatttgcaagctcgtccccgcc
aatccggccgatccctggtccgtcgaacgcaccatgaacgaggtgccacagttcaagcag
atggccgatgaggacgagacggtcgggcagttggtggagatcgccaaggctctcgaaggc
ctgttccgccacgcctcgacccacgccgccggtattgttatcggcgaccggccgctgcag
gaattgctcccgctgtaccgcgatccgcgctctgatatgccggtcacccaatacaacctc
aaatgggttgagccggcgggcctggtgaagttcgactttctgggtctcaagaccctgacg
accatccgctatgcggtagacatggtgaagcagcgggggatcgaactcgacatcgacgcc
atcgatattgaggacgctgccacctacaagctgtatgcacgtggcgacacatacggcatc
ttccagtttgaatcggcgggcatgcgtcgcgccttgatggatctcaagcccgaccgcatc
gaagacctgatcgccatgaacgcgctctatcggccgggcccgatggacaatatccccagc
ttcatcaaccgcaagcacggcaccgaggaggtggtttacccccatccggcgctgtctgag
gtgctggacgaaacctacggcattattgtctatcaagagcaggtgatgcagatcgcccag
ctcctctccggctactcgctcggcgaagccgacatgctgcgccgcgccatgggcaagaag
atcaaggcggagatggacaaccagcgcatccgtttccgtgagggcgcagggcccaacggg
gtgagcgaggcgttggccgacgaaatcttcgaccttctggccaagttcgcgaactacggc
ttcaacaagagccacgctgccgcctatgcgtgggtcagctaccagaccgcctatctcaag
gagcacttcccgcacgaattctacgcggcctcgatgaccctcgatatggcccagaccgac
aaactctccgacttccggcgcgaggccggcaagaagggcatcgaggtggttccgccatgc
gtcaaccagtccgaggtattgttctcggtcaagaacgaccgggtccattatggcctttcg
gcggttaagggcgtcggcagggccatggccgagcacattgtcgaagtgcggggtgatcag
cctttcaaggatctgggggactttgcccggcgggtcgatccgcgcgtgctcaacaagcgc
acgctcgaaaccctggtcaatgccggcgcgttcgactgccttgttccgcgtcgggagatt
gcctttgccgcggtcgaatcggtcatcggtacggctcaggccctcacggccgatcgcagt
tccggccaggtctcgctgttcggtggcgtggaggaagaaccattccgcctaccgacgggg
gttgctgtctggaattcaaccgaacgggccgatcgcgaactctcggctatcggcttccac
ctctcggcccatccgctcgatgcttatgccgatctgttcgaaaagctccgcgtccagcgc
tggagcgactttgaacgagcggtaaaggacggcgcgggggcagggcgcctggctggtacg
atctcatcgcgtaacgacaggcgaacgcgtaagggcacgccgatgatgatcctgaccctg
tcggatcagagcggcacttatgaatgcatcgccttctccgagcagatcaacgagttcggt
gccatcctgcagccgggcaattcggtcattctgcaggttggggccgatgagcgcgccgaa
ggcatcagcgtgcgcttgatgtctgccgagccgattgaaggcatggccgagcggatcgat
cggcagttgacggtgtttctcgccgatcccaaggcgcttggccccaccagcgcgcaactc
aagcgcggcggcaatggtaccgtgaatttcgtggtgatccgggatggaggggcacgcgaa
tacgagatcgaactgcccggcaagtacaacgtcacggccgaggtggccggcggcatcaag
gctctggacggtgtgacggacgttcgcttcgcctga
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