Devosia polycyclovorans: ACE4RL_16565
Help
Entry
ACE4RL_16565 CDS
T11232
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
dpv Devosia polycyclovorans
Pathway
dpv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ACE4RL_16565 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpv03400
]
ACE4RL_16565 (xseA)
Enzymes [BR:
dpv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ACE4RL_16565 (xseA)
DNA repair and recombination proteins [BR:
dpv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ACE4RL_16565 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
XHD27228
LinkDB
All DBs
Position
3320203..3321819
Genome browser
AA seq
538 aa
AA seq
DB search
MSQVLTNAAEFTVSEIAQAVKRTVEDEFGHVRVRGEISGFRGQHSSGHAYFTLKDDTASI
DAVVWKGSYARLAFKPEEGLEVIATGRLTTFPRSSKYQIVIENIEPAGAGALMALLEERR
KKLLAEGLFARERKRPLPYLPRVIGVITSPTGAVIRDILHRLDDRFPSHVLVWPVRVQGE
TCAPEVVNAIAGFNAFLPDGPIPRPDLLIVARGGGSIEDLWGFNEEAVVRAVAGSAIPII
TAVGHETDTTLVDYASDMRAPTPTAAAEASVPVRAELIAYVEDQGLRQRQTMRRGLASLK
DRLRAAGAGLPRPADLVSTQRQSLDLASSQLAGALRHFVQARRMAYSNLAATVQPRLVRQ
RHAELAERLAVLKRYGEAALGKTVDRARLRLDPCARQLPTAAATALERKQTALARLVPRL
SAKPLRAELRHAQGRLSPLGARLDAAAGQAAHARRVQWEQLGKLLETLSYRNVLARGYAL
VQDDTGAIVTSQAAARPGEALKLSFADGEVGVVVAGAPAARRKTSRSGPDEGSQESLF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggttctgaccaatgccgccgagttcaccgtttccgagatcgcccaggcggtc
aagcgcacggtcgaggatgagttcggccatgtccgggtgcgtggcgagatttccggattt
cgcggccagcattcttcgggccacgcctatttcaccctgaaagacgacaccgcctccatt
gacgcggtggtctggaagggcagttatgcccgcctcgccttcaagcccgaggaaggtctg
gaagtcatcgccacggggcggctgaccactttcccccgctccagcaaataccagatcgtt
attgagaatatcgagccggccggcgcgggcgcgctgatggcgctgctcgaggagcgccgc
aagaagctcttggccgaaggcctcttcgcacgcgagcgcaagcgccccctgccctatctg
ccgcgcgtgatcggggtcatcacttcgcccaccggcgcggtgatccgcgatatcctgcac
cggctcgatgaccggtttcccagccatgtgctggtctggcccgtgcgggtacagggcgag
acctgcgctcccgaggtggtcaatgccattgcaggctttaacgcctttctgcccgatggt
cccatcccccgccctgatctcctgatcgtggcgcgcggcggcggctcgatcgaagatctc
tggggcttcaatgaggaagcggtggtgcgggccgttgccggctctgccattccaatcatc
accgcagtggggcacgagactgacaccacgctggtcgactacgcctcggacatgcgcgcg
cccacaccgaccgctgccgcagaggcctcggtgccggtgcgcgccgagctcatagcctat
gtcgaggatcagggcctgcgccagcgccagaccatgcggcggggccttgccagcctcaag
gatcgcctgcgggcggcaggcgccgggctaccgcggcccgccgatctggtgtccacgcaa
aggcagagtctggatcttgccagcagccagctggccggcgcgctgcggcacttcgttcag
gcgcggcgcatggcctattccaatctggccgcaaccgtgcaaccgcggctggtgcgtcag
cgccatgccgagttggctgagcggctcgctgtcctcaagcgctatggcgaggcggccttg
ggtaagacggtggaccgcgcgcggctgcggctcgatccttgcgcccggcaattgcccacg
gccgccgccacggcgctcgagcgcaagcagacggccctggcccggctggtgccccggctt
tcggccaagccgctccgtgccgaattgcgccatgctcagggccggctctccccgctcggg
gcgcggctcgacgcagctgcggggcaagccgcccatgcgcgccgtgtgcaatgggagcaa
ttgggcaagcttttggaaaccctgagttatcgtaatgtcttggcgcgcggctatgcactg
gtacaggacgataccggcgcgatcgtcaccagccaggcagcagcccgtccgggtgaggcg
ctgaagctgagctttgccgatggcgaggtgggtgtggtggtcgccggcgcgccggccgcg
cggcgcaagacaagccggtcaggaccggacgaaggctcgcaggaaagcctcttttga
DBGET
integrated database retrieval system
