Daphnia pulex (common water flea): DAPPUDRAFT_101478
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Entry
DAPPUDRAFT_101478 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DAPPUDRAFT_101478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_101478
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
DAPPUDRAFT_101478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
EFX82085
JGI:
Dappu1_101478
UniProt:
E9GDI3
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MSESAESDSAPSPAKKPKIFKPNIPLRRVKTEKSPLPLLEEKNPSQPDRGVTWRGQSERT
RLGAQEASQPRPKYVQEEGGLFSQGVADKEHTDPVRNALSAVDRYEVKKANVVKLKAKPS
TVVKSNEEPHESHSPAHPAIIQQMDQFVLLRGSQIKNEDQVVVNQQMFEKLKYHQIEGIK
FMWNACLETDSSAGCILAHCMGLGKSLQVVALSHTVLMNPVCKVERVLIVCPVGTILNWV
NEFQIWLPGNSFETLNVCELISKDTREAKITRWLNYGGIIILGYEMYLSLTKEKRSDELF
QRALVNPGPDLLVCDEGHKLKNEISATFKAMDQISTRRRIILSGTPLQNNLHEFHTMVQF
VHRGLLGTTTDFGINYANVFEKGQMVDATEFNTSTDKQYFLVNSHTTRKGTVLPMSELGS
LRQRHPATDMALAPLTDVVPAQPRFVVSE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatcagctgaatccgattctgcgccatctccagctaagaagccgaaaattttt
aaaccaaacattccactcaggcgtgtgaaaactgagaagtctcctcttcctttgctggaa
gaaaaaaatccatcccagccagaccgtggagtgacgtggaggggacaaagtgaaaggacg
aggctgggagcccaagaagcgtctcagcctcgtcctaaatatgttcaggaagagggaggt
cttttcagtcagggagttgctgataaggaacacactgaccctgtgagaaacgcattaagt
gctgttgatcgatatgaggtcaaaaaagctaatgtggtgaagttgaaggcaaaaccatca
actgttgtgaaatcgaatgaagaaccccatgaatcacacagcccagcacacccagcaatc
attcagcagatggatcagtttgtgttgttgagaggcagccaaattaaaaatgaagatcag
gtggttgtaaatcaacaaatgtttgaaaagcttaagtaccatcaaatcgaaggtataaag
tttatgtggaatgcctgtttggaaaccgattccagtgctggctgcatcttggcccactgc
atgggtctgggcaaaagcctgcaggttgtggcattgtcgcatactgtgctaatgaatcct
gtctgcaaggtggaacgtgtattgattgtatgtccagttgggactattttgaattgggta
aacgagttccaaatttggctacctggcaactcatttgaaaccttgaatgtatgtgagcta
attagcaaagatacaagggaggcaaagataaccagatggttaaactacggagggattata
atattgggatatgagatgtatctgtcactcaccaaagaaaaacgttcagacgagctattc
cagcgagctcttgtaaatcctggaccagatcttctcgtatgcgatgaaggacacaaactc
aagaatgaaatctcggcgactttcaaagccatggatcagatttctactagacgccgcata
attttaagtggcaccccactacaaaataatcttcacgaattccatactatggttcaattt
gttcatcgtggcttactgggcacaacaacggacttcggtataaattatgcaaacgttttt
gaaaaaggccaaatggtagacgctacagaattcaacacgagcaccgacaagcagtatttt
ctagtgaactctcacactacaagaaaaggaacagttttgccaatgtcggaacttggaagt
ctccgtcaaagacatccggctacagacatggctttggcgcctttgacggatgttgttccc
gctcaaccccgattcgtagtttcagaataa
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