Daphnia pulex (common water flea): DAPPUDRAFT_102038
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Entry
DAPPUDRAFT_102038 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K10683
BRCA1-associated RING domain protein 1
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DAPPUDRAFT_102038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_102038
04121 Ubiquitin system [BR:
dpx04121
]
DAPPUDRAFT_102038
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_102038
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_102038
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
DAPPUDRAFT_102038
Ubiquitin system [BR:
dpx04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
DAPPUDRAFT_102038
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
DAPPUDRAFT_102038
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
DAPPUDRAFT_102038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_4
Ank_3
BRCT
zf-RING_6
BRCT_2
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-ProteinID:
EFX81945
JGI:
Dappu1_102038
UniProt:
E9GF56
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MNNNNMSKINDKFPESRKSFLELGKLLECEACQMLACNPHVLGRCDHTFCLSCANLHSGK
PCPKCGIFSEPGICRDLKIENLLKAYLPMAKFLGIDVTNTCENDVVNNNGSSAKPVAITP
SAASRSSKSSKNVMKTENFASPVQTVKKRERAVSLNESLNSTISGTPASKINKRNQKGET
LLHVACLKLDIQKVKELLGLGVNTNTQDNAGWTPLHEVVSSGNEALVTLLLENGANPNIP
GGYNETPLHDAVASKQTAIARLLVSYGADVNARNSRGLTPKDMYSKDDEDMKAALESSTI
VHSTHSYAERTTSQIIQLFVLNPEKKSQPRLNKLARALSFKLVSTYSSQVTHVAVRLDDP
SNVIKANPHFYSAVLQGHFIVDFKWIEESEKLERLTDPCLHEIDGTLSRAPSDGAPGRLN
IANQLPGLFNNCFFYLNGIFSTPSKADITQWIRHGGGSVLTRSPNPECIHPGEKIPYHAA
PKGLLAQCSHFILYDLNAKTQPSLKYNMSHVKTLSVDWLVACIENFLLVDPFDF
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataacaacatgtccaaaataaacgacaagtttcctgaaagtcggaaatctttt
ttagagcttggaaaactgctcgaatgtgaagcatgccaaatgctggcatgcaatccacat
gttctgggaagatgtgatcacacattctgtctgtcttgtgccaatcttcattctggtaaa
ccatgtccaaaatgtggaattttttcagaacctggcatctgtagagatctcaaaattgag
aatcttctcaaagcttacctaccgatggccaagtttcttggaattgatgtgacaaataca
tgtgaaaatgatgttgtcaacaacaatggatcaagtgcaaaacctgtcgcaataacacca
tcagctgcaagccgatcctctaaatcatctaaaaatgtaatgaaaactgaaaattttgcc
agtccagttcaaactgtaaagaagcgtgaaagggctgttagcctcaatgagagcctcaat
agtaccatcagtggaacacctgcatcgaagataaacaagcgtaatcaaaaaggtgaaact
ttgctgcatgtggcctgtctcaagctggacattcaaaaagtcaaggaacttttagggctt
ggggttaatacaaacacacaggataatgctgggtggactccattgcatgaagtagtgagt
tctgggaatgaagcgcttgtgactctgcttttggaaaatggtgcaaaccccaatattcct
ggtgggtataatgaaactcctcttcacgatgccgttgctagcaaacaaacagctattgcc
cgacttcttgtgtcgtatggcgccgatgtgaatgctcgaaatagtcgaggtctcactcca
aaggacatgtattcaaaagacgacgaagacatgaaagctgctctcgagtcttccacgatt
gttcattcaacacacagctatgccgaaaggacaacttcgcagataatacagctttttgta
ctcaacccggaaaaaaagtctcagccaagactcaataaacttgctcgcgcactcagtttc
aagttggtttcaacttactcgagtcaagtgactcatgtcgctgtgcgcttagatgatcct
agcaacgtcatcaaggctaacccgcatttctattctgcagttctccagggacacttcatc
gtcgattttaaatggatagaggaaagcgagaagctggaacgcttaacagatccatgtcta
cacgaaattgacgggactttgagtcgtgcaccatcagacggagccccaggccggttgaat
atcgccaatcagctcccaggcttattcaacaattgtttcttctatctcaacggcattttc
tctacgcctagtaaagccgacattactcaatggataaggcacggtgggggttcagttttg
acacgaagtcctaatcccgagtgcatccatccgggtgagaagataccttatcacgctgca
ccaaaaggtcttttggctcaatgctctcatttcattctgtatgatttaaacgccaaaacg
cagccatctctcaagtacaacatgtcacacgttaagacactatctgtggattggcttgtc
gcctgtatagagaattttctcctggttgatcctttcgatttctga
DBGET
integrated database retrieval system
