Daphnia pulex (common water flea): DAPPUDRAFT_102782 Help Entry DAPPUDRAFT_102782 CDS       T04347                                  Name (GenBank) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism dpx  Daphnia pulex (common water flea) Pathway dpx03020   RNA polymerase dpx03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:dpx00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     DAPPUDRAFT_102782   09124 Replication and repair    03420 Nucleotide excision repair     DAPPUDRAFT_102782  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dpx03021]     DAPPUDRAFT_102782    03400 DNA repair and recombination proteins [BR:dpx03400]     DAPPUDRAFT_102782 Enzymes [BR:dpx01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      DAPPUDRAFT_102782 Transcription machinery [BR:dpx03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      DAPPUDRAFT_102782 DNA repair and recombination proteins [BR:dpx03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       DAPPUDRAFT_102782 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 DUF5817 Motif Other DBs NCBI-ProteinID:  EFX81055 JGI:  Dappu1_102782 UniProt:  E9GHI4 LinkDB All DBs Position Unknown AA seq 1174 aa AA seqDB search MYDQDEDPIEDEDGEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE DSPAIDLQAEAQHSSGEVENPPRYVLKFEQIYLSKPTHWEKDGAPTAMMPNEARLRNLTY SAPLYVDITKTVHKEGEEQVETQHQKTFIGKIPIMLRSTYCLLNGMNDRDLCELNECPLD PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKFAYKTEIRSCLEHSSRPTSTLYVNML ARGGQGIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFEDPEMMEM VKPSLDEAFVIQEQNVALNFIGARGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLMAFLFRALFKTLMKEVRMYAQ KFIDRGKDFNLELAIKTRIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGAAVGLVKNLALMAYISVGSQPSP ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE VSMVRDIQDREIRIYTDAGRICRPLLIVENCKLLLKKRHVDMLKQREYINFSWQELVATG VVEYIDTLEEETAMIAMSPEDLRQGKDAYCTTYTHCEIHPAMILGVCASIIPFPDHNQSP RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLQYPQKPLVTTRSMEYLRFRELPAGINSVV AILSYTGYNQEDSVIMNASAVERGFFRSVFFRSYKDQESKRSADQEETFEKPFRDHCQGM RNAIYDKLDDDGIIAPGLRVSGDDVVIGKTITLPENDDDLESTTKKFSKRDASTFLRHSE TGIVDQVMLTLNAEGNKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG LTPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLQEYGY HLRGNEVLYNGHTGRKLNAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRAR DGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNLCGIIAVANLRNNTFECKGC KNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVI NT seq 3525 nt NT seq  +upstreamnt  +downstreamnt atgtacgatcaagacgaagatccgatcgaggatgaagatggcgaggaaatctcttcagag ctttggcaagaagcctgttggattgtcatcaacgcatatttcgatgagaaaggtcttgtg cgacaacagcttgattcgtttgatgaatttattcagatgtctgtacaaagaattgttgaa gattcacctgccattgaccttcaggcagaagcccagcattcttcgggggaggtagaaaac cctccgagatatgtcctaaaatttgagcagatttacctctcgaaacctacacattgggag aaagatggtgccccgacagccatgatgcctaatgaagcaaggctcagaaatctcacctac tctgccccgttgtatgttgatatcacgaaaactgtgcacaaagaaggcgaagagcaggtc gagactcagcatcagaaaacattcattggcaaaattcctatcatgttgagatccacttat tgcctgctgaatggaatgaatgatcgtgatttgtgtgaattgaatgaatgccctctcgat ccaggtggctattttatcatcaacggctcagaaaaagtcttgattgctcaagagaagatg gccacgaatacagtgtacgttttcagcatgaaggacggcaaattcgcttacaagacagaa attcgttcctgcttggaacactcgtcacgtccaacctctacgttgtacgtcaacatgttg gcacgtggtggtcagggaatcaagaaatccgccatcggccagcgtatcattgccattttg ccctacattaagcaagaaattcccatcatgattgtgttccgagctttgggtttcgtggcc gatcgcgatattctcgagcacatcatctacgactttgaagaccccgaaatgatggaaatg gtgaaaccttcgctggacgaagccttcgtcatccaggagcagaatgttgccttgaatttc atcggtgctcgtggtgccaggcctggtgtcaccaaagagaagcgtatcaagtacgcccgc gagattctccaaaaggaaatgttgcctcacgttggtgtgtccgacttttgcgagacgaag aaagcctatttcctcggctacatggtccatcgcttactgctggctgccttgggacgccgt gagctggacgatcgtgatcactacggcaacaaacgtctggatctcgccggaccgttgatg gctttcctcttccgagcccttttcaaaactctgatgaaagaagtccgaatgtacgcacag aaattcatcgatcgaggaaaagatttcaatttggaactggccatcaagacccgcatcatc accgacggactccgttactcgctggccacaggcaattggggagaccagaaaaaagcccat caggcccgcgctggtgtctctcaggtgttgaaccgattgactttcgcttcgaccttgtca catttgcgtcgcgtcaattcgcccattggtcgtgacggtaaactggccaaacctcgtcag ctccacaacacgctgtggggaatggtttgtccagccgaaacgcccgaaggagctgctgtc ggtctcgtcaagaatttggctttgatggcctacatttccgtcggttcccaaccgtcgccc atcctcgagtttttggaagagtggtccatggagaacttggaagaaatcgctccgtctgcc attgcggatgccaccaagattttcgtcaacggttgctgggtgggtatccatcgcgatccg gagcagttgatggccaccctgcgcaaactgcgtcgtcagatggacattatcgtgtctgaa gtatcgatggtgcgcgacatccaggaccgtgaaattcgaatttacacggacgccggtcgt atttgtcgtccattgttgatcgtcgagaactgcaaattgttgctgaagaaacgccacgtt gacatgctcaaacagcgcgagtacatcaatttcagctggcaggaactggtggccactggt gtagtcgagtacattgacactttagaggaagagacggccatgattgccatgtcgcccgag gacttgcgccagggtaaagacgcctactgtacgacgtacacgcattgcgagattcatccg gccatgattttgggagtttgcgcctcgattattccgtttcccgatcacaaccagtcgcct cgtaacacttaccaaagcgccatgggtaaacaagccatgggagtgtacattaccaacttc cacgtccggatggacactctggcccacgtcctgcagtatcctcagaaacctttggtcacg acacgctccatggagtacctgcgcttcagagagttgcccgccggcatcaattcggttgtt gccattctcagctacaccggatacaaccaggaggattccgtcatcatgaacgcttccgcc gtcgaacgaggattcttccgctccgtctttttccgatcctacaaagatcaagagtctaaa cgatcggccgatcaggaggaaacgttcgagaagcctttccgcgatcattgccagggaatg agaaatgccatttacgacaagttagacgacgacgggatcattgcacctggacttcgtgtg tctggcgatgacgtggttattggcaaaacgatcactcttccggagaacgacgacgacctg gagagcaccactaaaaagttctcgaaacgggacgcgtccactttcctgcgtcactcggag acgggcattgtggaccaggtgatgctgacgttgaacgccgagggcaacaagttttgcaag attcgcgtccgctcggtccgcatcccgcagattggcgacaaattcgcctcccgtcacggt cagaagggtacgtgtggaattcagtaccgccaggaggacatgccgttcacttgcgagggc ctgactcccgacatcatcatcaacccgcacgccattccgtctcgtatgacaattggtcac ttgatcgagtgcctccagggcaaagtgtcggccaacaagggcgaaatcggcgacgccact ccgttcaacgacgccgtcaacgtccagaagatctcgaacctcttgcaagagtacggctat cacctgagaggcaacgaagtgctctacaacggccacactggtcgcaagctcaacgctcaa gtctttctcggcccgacctactaccagcgtctcaagcacatggtggacgacaagatccac tctcgagcccgaggtccggtccagatcctcgtccgccagcccatggaaggtcgtgcccgc gacggcggtctccgattcggagagatggaacgagattgtcaaatcgcccacggagcggct cagttcctgcgcgagcgtctctttgaagtttccgatccttaccgcatccacgtttgcaac ctctgcggaatcatcgccgtggccaatttgcgcaacaacacgttcgagtgcaagggctgc aagaacaagacgcaaatctcccaagttcggctcccctacgccgcaaagctcctattccag gagctcatgtcgatgaacattgcaccccgtttgatggtcatctaa

DBGET integrated database retrieval system