Daphnia pulex (common water flea): DAPPUDRAFT_103378
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Entry
DAPPUDRAFT_103378 CDS
T04347
Name
(GenBank) putative SMC6, structural maintenance of chromosome protein 6, copy A
KO
K22804
structural maintenance of chromosomes protein 6
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_103378
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
DAPPUDRAFT_103378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
CLZ
SMC_hinge
DUF2937
Motif
Other DBs
NCBI-ProteinID:
EFX80391
JGI:
Dappu1_103378
UniProt:
E9GJ61
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MLKLIVLENFLCHDHLKVEFNKKINFIIGKNGSGKSAILTGIVVALGERASSTCRGQSLK
GKLISKKHSDLDRILAQMNIQVDNPVCILNQETAKNFLHNNDAQQKYKLFERATQIDAIH
NEYLVAKEEISKSKSCLEEKLQSLKFLHADVNKWKTKKEWYDEINKVHDKKEQLQNEILW
AHVEGFEKKATKALQKKKNQLSEIEKVQVAREKFAVVDKQLTEMKNRKKTFQNDLGQLGT
EKQRLMKDKTDLIKEIENLKKTYGDSEHAQEKARREISLYQLKEKFESFDSSRKVSEHQV
EQLNNACIQLRNETVDVKSESRRIHVSLETKKKTLAQLQKSDSNSCAVFGEWVPKLLQRI
ERTPFRGSKPKGPIGSYIKLRDRSWAPVIEHFFGPRLSCFVCSNDEDAKLLQKLVHEEVP
RNGQTPKILVSCMNGQVHDVREHKVHCSEELLSKDIHCLMDMLIIDDNDVTNVLIDLNGI
EQVLLIGKDRDACYLLADSSRVPYNCKSAITKEGNTYHPDPNYRSYCGRVRNTARYLQAS
VEDAIRNLQQDIENLQRDEIRIGQLFKNLSMQIQNNEGQLKHEESKLSSTQKEIIDIVMK
KRTIEEENVEGNSTDVLALEEDLVDVEKKLERIDEAFQTKSDNFEELKRELEKLQQTADQ
HQTTISSLMTNRGPLQESFRLNEIQQQNIKEKIDKLSTKLTSMQSNFDAFEADYEDARAK
AESEAALSAQASSRVLVTKSLKNLYSELRQLEKEVVAQEKELGSRDHVYAEYRRRNADYE
RAYLEVTRVQSSLGKMMDMSKKRKEYISVFRDCIESRTFKIFRALLRTRHYSGKISFDHS
KKTLSMIVVPPGRDESSQPAKRGRESGATDIRSLSGGERSFTTICFILSLWEATESPFRI
LDEFDVFMDHVNRSLCMELLVSEASEKSGRQFVFLTPLGVDNQHLNNMNDLFIFRMDDPD
REENNPV
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaactaattgtgctagaaaattttttatgtcatgatcatctgaaagtggaattt
aacaaaaaaattaatttcatcattggaaaaaacggcagtggaaaaagtgcaatccttaca
ggaatagtagttgctcttggtgaaagagcttcatccacatgtcgtggtcaaagtttaaaa
ggaaaactcatcagcaaaaagcatagtgatctagacagaatcctcgctcaaatgaatatt
caagtagacaatcccgtgtgcattttaaaccaagagacagcgaagaactttttgcacaac
aacgacgcacaacagaaatacaagctgtttgaacgtgcaacacaaattgatgctatacat
aacgagtatttagtagcaaaggaagagatatcaaaaagcaagtcttgcttggaagaaaag
ttgcagagtttgaaatttttacatgctgatgtgaataaatggaagaccaaaaaggaatgg
tatgatgaaatcaataaagtccatgacaagaaagaacaattacaaaacgaaatactttgg
gcacacgttgaaggtttcgagaaaaaagcgactaaagcattacaaaagaagaagaatcag
ctgtcggaaattgaaaaggtacaagttgctagagaaaaatttgctgttgttgataaacaa
ttaaccgaaatgaagaatcggaaaaaaacgtttcagaatgatcttgggcaattgggcact
gaaaagcaacgtctcatgaaagataaaactgatctaatcaaagaaattgaaaatttaaag
aagacttacggcgacagcgaacatgctcaagaaaaggcgagacgagaaattagtttatat
cagttaaaggaaaagtttgaatcctttgattcatcgcgaaaagtttccgaacatcaggtc
gaacagctaaataatgcttgtattcaattgaggaatgaaactgtggatgtgaagagtgaa
tcaaggcgtattcacgttagcttagaaaccaagaaaaagactctggcccagctccaaaaa
tcagactcaaactcatgtgcagtatttggggaatgggttcctaaattgctacaaagaatt
gaaagaacgccgtttaggggatcgaagcctaaagggccaatcggttcttacatcaaactt
cgagatagatcttgggcacctgtaatagagcatttttttgggccgaggctttcatgcttc
gtttgctccaatgatgaagacgcgaagttactccagaaactagttcacgaggaggtgccg
cgaaacggacaaactccaaaaattcttgtttcgtgtatgaatggacaggttcatgacgta
agggaacacaaggttcattgcagtgaggaattgctaagcaaagatatccattgtttaatg
gacatgttgattattgatgataacgatgttacgaatgtcctgatagacttaaacggcatt
gaacaagttctccttattggtaaagaccgagatgcgtgctatttattggcggattcctct
cgagtgccttataattgcaaaagtgccatcaccaaagaaggaaatacttatcatccggat
ccaaattatcgttcttactgtggaagagtaagaaatacggcaagatatcttcaagcttcg
gtggaagacgcaattcggaatttacaacaagacattgaaaacctgcaacgcgatgaaata
agaatcggtcaactcttcaaaaacctcagcatgcaaattcaaaataatgaaggacagtta
aaacacgaagaatcaaaactctcgtcaacgcagaaagaaataattgatattgttatgaaa
aaaaggacgatcgaggaagaaaatgtcgaaggcaattctacggatgttctggctttggaa
gaagatttagttgacgtggaaaagaagttggaaaggattgatgaagctttccaaaccaag
agtgacaatttcgaagaactaaagcgcgagttggaaaaattacagcaaacagctgaccag
caccagaccactatttcttctttgatgacaaacagagggccattgcaggaatcgtttaga
ttaaatgaaatccagcaacaaaacatcaaggagaaaattgataagttatctactaagctt
accagcatgcaatcaaattttgatgcttttgaagcagattatgaagatgctagggctaaa
gcagaatcggaagccgcgttgtctgcacaggcatcctctcgtgtactagtgaccaaatct
ttaaagaacctttattcagaattaagacaattagagaaggaagtcgttgcacaagaaaag
gaattaggatctcgtgaccatgtttatgcagaatatcgaaggcgcaacgcagattatgaa
cgagcgtacttggaagtcaccagagtacagagttctttagggaaaatgatggacatgagc
aagaagcgtaaggaatacattagcgtatttcgcgattgcatcgaatcaagaacattcaaa
atatttcgggcccttttgagaactcgtcactatagtggaaaaatttcgttcgaccacagt
aaaaagaccctttcaatgatagttgttccacctggtcgtgatgaatcctctcaaccggct
aaacgcggtcgtgaaagtggtgcaaccgacattcgatccttaagcggtggggaacggtct
ttcacgacgatttgcttcattttgtccttgtgggaagccaccgaaagcccattcagaatc
ctggatgagtttgacgtatttatggaccacgttaatcggtcgctctgcatggagttatta
gtttctgaagcaagtgagaaatcaggccgtcaatttgtttttctcacgccacttggagtg
gataaccaacatttgaataatatgaacgacttattcatcttcaggatggatgatcctgat
cgtgaggaaaataatcctgtttaa
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