Daphnia pulex (common water flea): DAPPUDRAFT_104930
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Entry
DAPPUDRAFT_104930 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03013
Nucleocytoplasmic transport
dpx03015
mRNA surveillance pathway
dpx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DAPPUDRAFT_104930
09122 Translation
03013 Nucleocytoplasmic transport
DAPPUDRAFT_104930
03015 mRNA surveillance pathway
DAPPUDRAFT_104930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_104930
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_104930
03009 Ribosome biogenesis [BR:
dpx03009
]
DAPPUDRAFT_104930
03012 Translation factors [BR:
dpx03012
]
DAPPUDRAFT_104930
Enzymes [BR:
dpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DAPPUDRAFT_104930
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
DAPPUDRAFT_104930
mRNA cycle factors
Stress granule specific factors
DAPPUDRAFT_104930
Spliceosome [BR:
dpx03041
]
Complex C
Other components
EJC/TREX
DAPPUDRAFT_104930
Ribosome biogenesis [BR:
dpx03009
]
Eukaryotic type
90S particles
Helicases
DAPPUDRAFT_104930
Translation factors [BR:
dpx03012
]
Eukaryotic type
Initiation factors
eIF-4
DAPPUDRAFT_104930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
UvrD-helicase
TniB
Motif
Other DBs
NCBI-ProteinID:
EFX78817
JGI:
Dappu1_104930
UniProt:
E9GNU3
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MESKGRRVVQQLPDDLTNIEFETSEDVNVIPTFDSMGLREDLLRGIYAYGFEKPSAIQQR
AIAPVIKGRDVIAQAQSGTGKTATFSISILQSLEIQTRETQILVLSPTRELAVQIQKVIL
ALGDYMNVQCHACIGGTNVGEDVRKLDYGQHIVSGTPGRVFDMIRRRTLRTRSIKMLVLD
EADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELT
LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNSKRKVISLVINYDLPINKRELY
IYRIGRFGRLERKNVFNSY
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagtctaaaggcagacgtgttgtccaacagttgccggatgatttaactaatattgaa
tttgaaacgagtgaagatgtcaatgttattcccacatttgacagcatgggcctccgtgaa
gacctgctaagaggaatttacgcttatggatttgaaaaaccatcagctattcagcagaga
gcaattgccccagtaatcaaggggagagacgttattgcccaagcccaatctggtactggc
aaaacagccacattttcaatttcaattcttcagagtcttgagattcaaacaagagaaact
caaatattggttttaagccccactcgagagttggcagttcaaattcagaaagttattctg
gctcttggtgattacatgaatgttcaatgccatgcgtgtatcggcggcactaatgttgga
gaggatgttcgaaaattggactacggtcagcacattgtttctggaacccctggacgtgta
tttgatatgattcgtcgacgtacactaaggacacgttcaattaaaatgttggtcctggat
gaagccgatgaaatgttaaataaagggttcaaggagcaaatttacgatgtctaccgttac
cttcctccagcaacacaagtggttcttctttcagccacattgcctcatgaaatcttggag
atgaccagcaaattcatgacagatcccattcgcattttagtcaaacgtgatgagttgaca
ctcgaaggaatcaaacagttctttgtcgctgtcgaaagagaagaatggaagtttgacacg
ttgtgcgatctgtacgacacactgacaatcacgcaggcggtcatcttttgtaattctaaa
cgcaaggttatttcgttggtcattaactacgatcttcctataaacaaacgtgagttatat
atctatcgtatcggtcgttttggccgattagaacgtaaaaacgtgtttaactcttattaa
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integrated database retrieval system