Daphnia pulex (common water flea): DAPPUDRAFT_11231
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Entry
DAPPUDRAFT_11231 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K19672
intraflagellar transport protein 140
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dpx03037
]
DAPPUDRAFT_11231
Cilium and associated proteins [BR:
dpx03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
DAPPUDRAFT_11231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
TPR_IF140_C
Clathrin
ANAPC3
TPR_COPA_B
TPR_2
TPR_GEMI5
TPR_12
TPR_7
PRORP
Motif
Other DBs
NCBI-ProteinID:
EFX88127
JGI:
Dappu1_11231
UniProt:
E9FXN8
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
DKAARDALLSFSCHLRRGRVEQAYQAVRSFANPKIWESLARSCVQLRRPDVGLICLGKLG
NARAAAAVRSAQEKYLGQVDAITAVLAVQLGMIKDAEAMCEQSLCYDLLSRMYQASNRWD
EALQLAHTKDRINLKRTYYEYARHLEGEGNTTLALQMYEKCQTHHFDVPRMLFEDTTALQ
NYCTSSRDPERLRWWAQFLESSGEMDTALEHYARAGDYLSLVRLHCYLGDLNRATELAEQ
SQDRAACFHVARQHEANDNIPEALKFFGQAAAYGNAVRLCKEHELDDQLYRYAMLGEQEE
MIEAARYFEGSSTNSDRQPRFDRAVMLYSKAGLLDTALDLASRTEQHEAVLELARRLDKN
SNPASLQRCADYLASHRHYDAAVDLLAMAGKNSDAVDMCLKYNVTLTEALADQLVNGENN
SRLLTQLAEVAQRQGDYQLAAKKFTQAGDKYQAMKALLKSGDTDRIVFFANVSRQPDIYI
LAGNYLQTLDWRSHPEYVKHIVTFYTKARSPDLLVGFYEACAQAEVDEYQNYDNAMNALK
EAHKIMSKTPESSQSTRSKALYMKMAFLEQFINIRKMSATNLQGISQFESILQSSSMDLG
ILKPGNVYSAIFQLYV
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gataaggcagcccgcgacgcattgttatcattcagctgtcacctaagacgtgggcgtgtg
gagcaagcctatcaggctgtgcgatcttttgccaatccgaaaatatgggaaagcttagct
cgcagctgcgtccaattgaggcgaccagacgtcggcctaatttgcctggggaaattaggc
aacgccagggcagctgcggcggttcgatctgcccaggagaaatatttaggccaagtggat
gcaattacagctgttcttgccgtccagttgggcatgataaaagatgcggaagcgatgtgc
gagcaatctttatgctacgaccttcttagccgaatgtaccaggcttctaaccgatgggac
gaagcgttgcaattggcccacactaaagatcgaatcaacttgaaacggacctactacgag
tatgctcgtcatctcgaaggcgaaggaaatactacgttagcgctccaaatgtacgaaaag
tgtcaaacccatcattttgatgtcccacgaatgctattcgaagatacaaccgcccttcag
aattattgcacttccagtcgagacccagaacgacttcgttggtgggctcagtttttggaa
agcagcggagagatggatacggcgctagaacactacgccagggctggagactacctttca
cttgtgcgacttcattgctatttgggcgatttgaatcgagcgaccgagttggctgaacag
agtcaagaccgcgcagcttgcttccacgtcgcccggcaacacgaggctaacgataacatt
cccgaggctttgaagttttttggccaggcagccgcctacggtaacgctgtccgtctatgc
aaagaacacgaactggatgaccagctgtaccgatacgctatgctgggcgaacaagaagaa
atgattgaagctgcacgttattttgaaggttcatcgactaacagcgatcgccaaccgaga
ttcgaccgagcagtcatgctgtacagtaaagctggacttcttgataccgccctcgatttg
gcttctagaacggaacagcatgaagctgtattagaattagctcgacgtttggacaaaaac
tcgaatcctgcatcactgcaacgttgtgctgattatttggcaagtcaccggcattatgat
gcagctgtagatttactagcaatggcaggaaagaattccgatgcagttgacatgtgtttg
aaatacaatgtcacgttgacagaagcgttggccgatcaactcgtaaatggggaaaataac
agccgattgctgactcaactagctgaagttgctcaacgccagggtgactaccagttagcg
gccaaaaagtttactcaagcaggagataaatatcaagcgatgaaagctctcttaaaatca
ggcgatacggatcgaattgtcttcttcgcaaacgtgtctaggcagcctgatatttatata
cttgctggaaactatttacaaaccctcgactggcgctcccacccggagtacgtcaaacac
attgtgaccttctacacgaaagctagatcgcctgatctccttgtcggcttttatgaagcc
tgtgcacaggccgaagttgatgaataccaaaactacgacaacgcaatgaacgcattgaaa
gaagcgcacaaaattatgtccaaaactcctgaaagtagtcaatcaacaagatctaaagca
ctgtatatgaaaatggcttttctggagcagttcattaacatcagaaaaatgtctgccaca
aaccttcaaggaatttctcagtttgaaagtatcttacaatcatctagtatggatttaggc
attttgaaaccaggaaatgtttactctgctattttccaactttatgtt
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