Daphnia pulex (common water flea): DAPPUDRAFT_190647
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Entry
DAPPUDRAFT_190647 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03030
DNA replication
dpx03410
Base excision repair
dpx03420
Nucleotide excision repair
dpx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DAPPUDRAFT_190647
03410 Base excision repair
DAPPUDRAFT_190647
03420 Nucleotide excision repair
DAPPUDRAFT_190647
03430 Mismatch repair
DAPPUDRAFT_190647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpx03032
]
DAPPUDRAFT_190647
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_190647
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_190647
DNA replication proteins [BR:
dpx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
DAPPUDRAFT_190647
DNA Replication Termination Factors
ELG1-RFC complex
DAPPUDRAFT_190647
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
DAPPUDRAFT_190647
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
DAPPUDRAFT_190647
Check point factors
HRAD17(Rad24)-RFC complex
DAPPUDRAFT_190647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_22
AAA_16
AAA_11
AAA_2
Rep_fac_C
AAA_5
RuvB_N
Mg_chelatase
nSTAND3
Hda_lid
SLFN-g3_helicase
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
EFX89335
JGI:
Dappu1_190647
UniProt:
E9FTA0
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MSLWVDKYRPNTLAKLDFHLEQGERLQKMVTKGNFPHLLIYGPPGAGKKTRVSALLRELY
GPGVEKLRMEHQNFTTPSNKKIEVMTVASNYHIEVNPNDAGIYDRIVIQEMIKNIAQAQQ
LDIGGQREFKVVILTEVDKLTKDAQHALRRTMEKYMTTCRLILCANSTSKIIAPLQSRCL
AIRVPAPSQDDIIKVLQMVSKKEGITLPADFAIRLAERSERNLRRALLMLEACKVQQYPF
SVKQEIVEPDWEVYLRETGQKMVSEQSPKALLEVRGRIYELLSHCIAPEMIIKKLLKEIL
KNCDGQLKAEVTSMAAYYEHRLCLGSKVIFHIEAFVAKFMAIYKRFLEDSFANMM
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttgggtagataaatatcgtcctaacacacttgcaaaactagactttcacctt
gaacaaggagaacgcttacaaaaaatggtaaccaaaggtaatttccctcatttgcttatc
tatggcccacctggagcaggaaagaaaacacgagtatcagcactcctgagagaactttat
ggacctggagtggagaagctgcgtatggagcatcagaattttacaaccccatccaacaag
aaaatagaagtcatgacagtcgcaagcaactatcatattgaagttaatccaaatgatgca
gggatctatgacagaattgttatccaagaaatgatcaagaacattgcacaagcacaacaa
ttagatattggtggtcaaagagaattcaaagttgttatactgactgaggttgacaaatta
accaaggatgcccaacatgctctcaggagaaccatggaaaagtacatgactacctgtcgc
ttgatcctgtgtgcaaattcaacttcaaaaataattgcaccactccaaagcagatgtctt
gccataagagttccagcccctagccaagatgacatcattaaagttttgcagatggttagt
aagaaagaaggaattaccttgcccgctgattttgccattcgtcttgcagagagatctgaa
cgtaatttaaggagagctctgttaatgttagaggcatgtaaagtacagcagtatcctttc
agtgttaaacaagagatagttgaaccggattgggaagtttatcttcgagaaacaggacaa
aagatggtttctgaacaaagtccaaaagcgttgctggaagtacgaggaagaatctatgaa
cttctatctcactgcattgccccggaaatgatcattaagaaactgctcaaagaaattctg
aaaaactgtgatggtcaattaaaagctgaagtaacttcaatggcagcttactatgaacat
cgcctttgccttggaagtaaagttatctttcatattgaggcttttgttgctaaattcatg
gcaatttataagcgtttccttgaagatagctttgctaatatgatgtaa
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