Daphnia pulex (common water flea): DAPPUDRAFT_193332
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Entry
DAPPUDRAFT_193332 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAPPUDRAFT_193332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_193332
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
DAPPUDRAFT_193332
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-ProteinID:
EFX86237
JGI:
Dappu1_193332
UniProt:
E9G2E4
LinkDB
All DBs
Position
Unknown
AA seq
218 aa
AA seq
DB search
METEENSIRALKCEQSVLSRADGSVMFSQGNTVVMASVYGPLEAKIQKELSDRMYIELNY
KPKTGMPGVAERGKEKLIKTTCNHIILTNLHPRTAVCITVQEMQDGGTLLAASINAVCLA
LLDSGLPLQCLVAAVTCLVDKKDRIILDPCISTVKEGYKAMFTFAFDSQKYNLILSHCEG
QVPYQLFQKAMVLCQKASHVIFDFYRQAVLRKFSNELL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggagactgaagagaatagcattcgtgctttaaagtgcgaacaaagcgtactgtcacgt
gcagatggctcggtgatgttttctcaagggaatactgtggtaatggcttcagtctatgga
cctttggaggctaaaattcaaaaggaactgtcggatagaatgtacattgaacttaactac
aagccaaaaacaggaatgccaggtgttgctgagcggggaaaggagaaactcatcaagacc
acttgcaatcacattattctgacaaacctgcaccctcgaacagctgtctgcataacagtt
caagaaatgcaagatggtggaactttgctagcagcctccatcaatgctgtgtgccttgca
cttcttgactcgggtttacccctgcagtgtcttgtagctgcagtgacttgtttggtagac
aagaaggatagaattattctagatccatgcatcagcacagtcaaagaaggttataaagca
atgtttacctttgcctttgacagtcaaaaatacaacttaattctgagccattgtgaaggc
caagttccctatcaactttttcaaaaagccatggtgctgtgtcagaaagccagtcacgtc
atctttgatttctaccggcaagcagtactacgaaagttttccaacgaacttctgtaa
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