Daphnia pulex (common water flea): DAPPUDRAFT_195959
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Entry
DAPPUDRAFT_195959 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpx03009
]
DAPPUDRAFT_195959
Enzymes [BR:
dpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DAPPUDRAFT_195959
Ribosome biogenesis [BR:
dpx03009
]
Eukaryotic type
Pre-60S particles
Helicases
DAPPUDRAFT_195959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
EFX81616
JGI:
Dappu1_195959
UniProt:
E9GFC7
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MKTEWNELGVKLSEPIIQTLKDLNFIKTTPVQAACIPLLLQKKDVCAEAVTGSGKTLAFI
IPILEILLARSAPLKKHEIGALIISPTRELASQIDEVLTKFLINLPQFTHLQMIGGAHTV
VQDIRDFTSHGAHIIITTPGRFMDLLIRQGDHINLAGGLKSLEILILDEADRLLDLGFHA
TLNTILGFLPKQRRTGLFSATQTREVESLARAGLRNPVAVTVKEKNLNNDGSRTPASLAN
YYMVVEGDQKLAVLITLMKTKAPGKFMVFMSTCAAVEYFSLILKHFLPSVTVMSIHGKLK
TTRFKIFDKFRSLKTTGLLVCTDVMARGIDIADIDWVFQFDAPSCASDFVHRCGRTARIG
NRGTALAFLQPNEEPYVHFIDINQKVKLTHMELPDDLPDNLAEIRQMQQNDRAMMDKATR
AFVSYIHSYVKHECSVLLRVKDLDFGRLAVGFGLLTLPKMPELKNRKTDFFQPVSIDLNL
ITYKDKAREKIRQEKLAIYRETGVWPSSKANSGPMKKNESWSEKKAQKCRKKEKKKLRVE
QKKRKRAAVDEDEWNELARDARLLKKLKKRKISEKSFEKQFNNKTEAAAPAEEA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagagtggaatgagttgggtgttaaacttagcgaaccaattattcagaccttg
aaagatcttaacttcataaaaacaacacccgttcaagctgcatgcatacctctgttgctg
caaaagaaagatgtttgtgctgaagcagtcacaggctcaggcaaaacattggcattcata
attcccattttagaaattttgctggcacggtctgcaccactgaaaaaacatgaaatcggg
gcccttataatatcccctacaagagaattggcatcacaaattgatgaagtgttgacaaag
tttctaattaacttgccccaatttacccaccttcaaatgattggaggtgctcatactgtt
gtacaagatattagagactttaccagtcatggagctcacattattatcactacacctggg
cgctttatggatcttcttattcgacaaggtgaccatattaaccttgctggaggactgaag
tcattggaaattctcatcttggatgaagcagatcgtctgttggacctgggatttcatgct
accttgaacacaatattgggttttcttccgaaacaaagacgaacaggtcttttctctgct
acccaaaccagagaggttgaatcattggctagagctggattgagaaatccagtagcagtt
acagtgaaagaaaagaatttgaacaacgatggttcaagaacaccagcttccctggccaat
tattacatggtggttgaaggagaccagaaattagctgttttgataactttgatgaaaacc
aaagctcctggcaaattcatggttttcatgtccacttgtgcagctgttgaatatttttca
cttattctaaaacattttttgccttcggttactgtgatgagtattcacggaaaactgaaa
acgacccgcttcaaaatctttgacaagttcaggagcctcaaaaccaccggactgttggtt
tgcactgatgtcatggcccgcggtatcgatattgctgacatcgactgggtgtttcagttc
gacgcaccttcgtgtgcatcggatttcgttcatcgttgcggaaggactgcccgcatcggt
aatcggggaacagcactagcctttctccaacccaatgaagagccttacgtccacttcatt
gacatcaaccaaaaggtgaagttaacccatatggaattacctgatgacctgcccgataac
ttggctgaaattcgacaaatgcagcagaacgatcgcgcaatgatggacaaggccactaga
gcgtttgtttcttacatacactcttacgtcaaacacgaatgttcagttctccttagagtc
aaagatttagatttcggtcgtttggccgtgggtttcggtctccttacactcccgaaaatg
cccgagctcaaaaatagaaagacggatttctttcagccggtcagcattgatctcaacttg
atcacctacaaggacaaggcccgagaaaagatacgacaagagaaattagccatctaccgc
gagacgggagtttggccgtcatcgaaagccaattccggaccgatgaagaaaaacgagtcc
tggtcggagaagaaggcacagaaatgtcgcaagaaggagaagaaaaagctcagggtggaa
cagaagaaacgtaaacgtgctgccgtcgacgaagatgagtggaacgagctggcccgtgac
gctcggcttctcaagaaattgaaaaagcgaaagatctccgagaaatctttcgagaaacag
ttcaacaacaaaaccgaggctgctgcacctgccgaagaagcgtga
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