Daphnia pulex (common water flea): DAPPUDRAFT_198208
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Entry
DAPPUDRAFT_198208 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DAPPUDRAFT_198208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_198208
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_198208
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DAPPUDRAFT_198208
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DAPPUDRAFT_198208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-ProteinID:
EFX77765
JGI:
Dappu1_198208
UniProt:
E9GRW5
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MLDETGLGEGEVTVAEEISETVEEEIVPPHPAGIVLRRCGYSTMPTMEDLAIKGLDENGK
CIITSFSIIRQGYGRIFFEGPLDVANLNLDEIVLFRHKEVTVYPDDSKKPPEGEGLNRKA
EITLDRVWPVDKSTGDYITNPERLAVLRYEERLARAAHRLQAKFIEYRPETGSWVFRVNH
FSKYGLEDSDEESELPAAPPKAAAALPTTQGQAAQTAAIGVGLGGLSATITQVTSMSMTF
EEDMGVEDDLVIHRFADEFDDSLRVQSPPPVSTQLARTLGMPSQRVQIMKASFFDADNDY
MQDVSMGNFFDQSARMSQSIAPRKDMSRLFKDSPAQSPVSLFKSSAIPGIQQPEDLNRSH
VPMDQSFTAIAKLQQTTEIENLSTYVRLEHARNSEQCRKVVPRFATAEIPLSRSIIRDKF
GIVMDASLFQNRQSRVGWGPDLQHLELSTTTRLSLLSVKTSDLKQNIDLEEDIFSVDSKN
PYVVLLATYLNHTKATVVDGVPTLRPVPGSQAVGFLKAATESLLSKLKNKGNPESLQLLN
YMGKVWNLCIALWGPLDVEAGSHAETMVRKETLTQWLEEATMETNITGLNEEEEVFITFF
KMLSRHDVAGAARLAHKNGEYYLALLISQAGSSLAFKGMLQRQLNLWTENRADAFITQDR
LRVFALLAGITVWETTEGKINTCEGMDWIKALAHHLWYVISPVGSITDALLEYEAACGIS
SDQNEAEIYASEPAPSYSQTSTSDLCFQLISLYCHRTIPLEKLVNPLSHTWNVCENVLSW
LLWQQLQALGYSHLSETAAAQLSIAFASQLENCGLWHWAIFVAMHLKSSPSFVQAFVEDI
LGRHIGQEKDEQCERFLVEKLCVPSQWIEKCRAVKALYAFNPKLQATSLLAAGLYSQAHD
VICDELAPEAILSESYQELEELLAPLADPERFSTIADWYLKGKVYWNYITVVKAVDRILK
QDNSSEKGMQLEKLTPDLTSLCNLVSSLPVPSAKHRLVRTEIAQKAAYILKNVIGLQSVN
ASEEIVVPPRFVLPQLRQLPVTQDYSLSELNNVVRAYFLELKV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgctggatgaaactggccttggagaaggggaagtcactgttgcagaggaaatcagtgaa
acagtcgaagaagaaatcgtgcctcctcaccctgctggcatagttttacgtcgttgtgga
tattcgacaatgccgaccatggaagacttggcaatcaaaggattggatgaaaatgggaag
tgtattattacttcgttttctattattcgtcagggctatggtcgaatatttttcgaaggc
cctttggatgtcgcgaacttgaatctggatgaaattgtattgtttcgccacaaggaagtg
actgtataccccgacgattcaaagaaacctcctgaaggagaaggactcaaccgcaaagct
gaaatcactttggaccgcgtctggcctgtagataaatccactggagactacatcaccaat
cctgagagattagctgttttgcgttacgaagaacgacttgcccgagctgcccatcgccta
caagctaaattcatcgagtaccgacctgaaacaggatcctgggtgtttcgagtgaaccat
ttctccaaatatggattggaggattcggatgaagaaagtgaacttccagccgctccaccc
aaagccgctgctgctcttccaactacacaaggccaggcagctcaaaccgccgccattggt
gttggattaggaggattgtctgcgacgattactcaagtcacctcaatgtcgatgacattt
gaagaagatatgggtgtcgaagacgatttggttattcatcggttcgctgatgagtttgac
gactcgctgcgcgtccagtcacctccgcccgtcagtacgcagttggccagaacattgggc
atgccttctcagcgagttcaaattatgaaagcatctttcttcgatgcagataacgactat
atgcaagacgtttccatgggtaacttcttcgatcaatctgcgcggatgtctcagtcgatt
gcaccaagaaaagacatgagtcgcctctttaaagattcccctgcgcagagtccagtaagc
ctcttcaagtctagcgccattcccggaatccaacagccagaggaccttaataggtcgcat
gtaccgatggatcaatccttcactgccatagctaaactgcaacagactactgaaatcgaa
aacttgtcaacttacgtccgattggaacacgcccgaaattcagaacaatgccgaaaagtg
gtaccacgattcgccacagctgagattcccctatctcgatccatcattcgggacaaattt
ggaattgttatggatgcttccttgttccagaatcgtcagtcacgtgtaggatggggtccc
gatttgcaacacttggagctctcgaccacaactcgactctcactattatcggtgaaaacg
tctgatctgaagcagaacatcgatctggaagaagatattttcagtgttgatagcaaaaat
ccatacgttgtcttactagcgacgtatttgaaccacacaaaggcaactgtagttgacggt
gtgccaactctgcgtccagtaccaggatcgcaagctgttggtttcctcaaagcagccacc
gagagcttactctccaaactgaagaacaagggcaatccggagtcgttgcagctgctcaac
tatatgggcaaagtttggaatctttgcatcgctctttggggtcctttggacgtcgaggct
ggttcgcacgcggaaactatggttagaaaggaaactttgacgcagtggctggaagaagct
accatggagacaaatatcaccggtctgaatgaagaagaagaggtattcataacttttttt
aaaatgttgtctcgccacgacgttgctggcgctgctcgcctcgctcacaagaacggcgaa
tactatctggcgttgctgatttcacaagcaggatcgtccctggctttcaagggaatgctt
caacgccaactgaacctctggacggaaaaccgcgccgatgccttcatcactcaagatcgt
cttcgcgtctttgccttattggctggaatcaccgtctgggaaaccactgagggcaagatc
aacacctgtgaaggaatggattggatcaaggcattggcccatcatctatggtacgtcatt
tccccggttgggagcatcactgacgccttgctcgagtacgaggccgcttgcggaatatcg
tcagatcagaacgaagctgaaatctatgccagtgagccagctccttcctattcacaaaca
tctacttcagacttgtgtttccaactgatttcactctactgtcaccgtacgattccgctg
gaaaagttagtgaatcctctcagccacacatggaacgtatgcgaaaatgttttgtcttgg
ttgctgtggcagcaactccaagccttgggctactcacatctttcggaaactgctgctgcc
cagttgtcgattgcgttcgcttcccagttggaaaattgtggcctctggcattgggccatt
tttgttgcgatgcatctgaaatcgtcaccgtctttcgttcaagcgtttgtcgaagacatc
ctcggccgtcatatcggacaagaaaaggacgagcagtgcgagcgtttcctggtcgaaaaa
ctttgcgttccgtctcagtggatcgagaaatgtcgggcagttaaggcgctctatgcgttt
aatccgaaactgcaggccacttccctgcttgccgctggactttacagccaagcccatgac
gtcatctgtgatgaacttgctccggaagctatcctgtctgaatcctatcaggagttggag
gaactcttggctcccttggctgacccggaacgattcagtacgattgccgattggtaccta
aagggcaaggtttattggaattacatcacagtcgtcaaagccgtagatcgaattttaaag
caggataattccagtgaaaagggaatgcaactagaaaaattaacaccagacttgacatcg
ctctgcaacttggtgtcttctctacccgtaccctccgccaagcacaggctggttcgcacg
gaaatagcccagaaagcggcctacattttgaaaaacgttatcggactccagtcggtcaac
gcatccgaggaaattgtggtcccccctcgttttgtcctgccgcaactccgccagcttcct
gtgacgcaggattactcgctctcagagcttaacaacgttgttcgtgcgtactttctcgaa
cttaaggtttaa
DBGET
integrated database retrieval system
