Daphnia pulex (common water flea): DAPPUDRAFT_198891
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Entry
DAPPUDRAFT_198891 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAPPUDRAFT_198891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_198891
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DAPPUDRAFT_198891
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
DAPPUDRAFT_198891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
Baculo_PEP_C
DUF4407
Tweety
Motif
Other DBs
NCBI-ProteinID:
EFX76526
JGI:
Dappu1_198891
UniProt:
E9GVI3
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVELFEDIWQKVHNAANSNQKEKYETDLKKEIKKLQRLRD
QIKSWIQSAEIKDKSQLVENRKLIETQMERFKIVERETKTKAYSKEGLGAAQKLDPAQKE
REDISQWLNTSIENLNIQIDQFECEIESLLAAKKKKLDKDKQERLDKLKEFLERHRFHIR
KLETLLRMLDNLTVEVTQIKKIKDDIEYYIEAASTDPDFEENTYLYDDINFLDEFADVVG
TVGGNFWSCFVLFSFLSSLLGFNWNSNWIMFEVK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacgagaaaattgcaaggtgaaattgaccgctgtttgaaaaaagtaacagaa
ggtgttgaattatttgaggacatttggcaaaaggttcataatgcagccaacagcaatcaa
aaggagaagtatgaaactgatctcaagaaggagatcaagaagcttcaacggctacgagac
cagatcaaatcctggatccagtctgctgagatcaaagacaagagccaactcgtggaaaac
agaaagctcattgaaactcaaatggagaggttcaaaattgttgaacgggaaacaaagaca
aaagcatattccaaggaaggactgggtgcagctcaaaaattggatccagcccagaaagaa
agagaagacattagccagtggcttaatacttccatcgaaaacctcaacattcaaattgac
caatttgaatgtgagattgaatctttgttagcagccaagaagaaaaagctagacaaagac
aagcaagagcggctagacaagcttaaggaatttttggaaaggcataggtttcacattcga
aaactggaaaccctgttaagaatgctggacaatttgacagttgaagtcacccagataaag
aaaatcaaggatgacattgagtattacattgaagcagcctctacggacccggatttcgaa
gagaatacgtatctctatgatgatatcaacttcttggacgagtttgcggacgttgtcggt
acagttggaggtaatttttggtcttgtttcgtgttattttcctttttgagttctttattg
ggattcaattggaactcaaactggatcatgtttgaggtcaagtga
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