Daphnia pulex (common water flea): DAPPUDRAFT_199058
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Entry
DAPPUDRAFT_199058 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DAPPUDRAFT_199058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_199058
Spliceosome [BR:
dpx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
DAPPUDRAFT_199058
Complex C
U4/U6.U5 tri-SnRNP related factors
DAPPUDRAFT_199058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
SWAP1_C
HIND
SRP-alpha_N
Motif
Other DBs
NCBI-ProteinID:
EFX76307
JGI:
Dappu1_199058
UniProt:
E9GW90
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MANRTIKEAISVKGTNPQYLVEKIIRTRIYDSKYWKEECFALTAELMVDKAMELRYIGGI
FGGNVKPTPFLSLTLKMLQIQPEKDIVVEFIKNEDFKYVRALGAFYMRLVGTSVEIYKYL
EPLYNDYRKIRFQNKEGNFELLYMDDFIDSLLREERFCDVILPRLQKRQILEEANEVEPR
VSALEEDLEEEDSESEEEEGERKGGSLSPPPTTSRSKQDSDRERERSRRNRDKERERERS
RERRDRHRDRSRSREKRNRSRERDRDRSRERDRSRRQRSRSVERSRDYRRDQDRDRRDRK
DRGKDRESERDRSKRGEDRDKYNNKKKDSKKSSSSSAAIDPEIAEANALRAKLGLAPLRP
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcgaacaatcaaagaggccatttctgttaaaggaacaaatcctcaatacttg
gttgaaaagattattagaactcgaatttatgattcaaagtactggaaagaagaatgcttt
gctttgacggctgagttgatggtggataaggccatggaattaaggtacattggtggaata
tttggtggcaatgttaaacctactccatttctctcacttacacttaaaatgcttcaaatc
caaccagaaaaagacattgtagtagagtttataaaaaatgaagatttcaaatatgtccgt
gccttgggagcattctacatgagacttgttggaacatctgtggaaatctataaatattta
gaaccactttacaatgattacagaaaaattcggtttcaaaacaaggaaggaaattttgag
cttctttatatggatgatttcattgatagtttactgagagaagagcgtttttgtgatgtt
atcctgcccagacttcagaaacgtcaaattctggaagaagctaatgaagttgagccgaga
gtatcagctttggaagaagacttggaggaagaagattcagaaagtgaagaagaagaaggt
gaaaggaaaggaggttcgttgtcgccccctcctactacatcgcgttcaaagcaggacagt
gatcgagaacgggagcgttctcgtcgtaatagggataaagaacgtgaacgagagagaagt
agggaaagacgtgatcgacatagagacagaagtcgaagtcgtgaaaaaaggaatcgcagc
cgtgagcgtgacagggaccgcagtcgtgaaagagatcgaagtcgccgtcagcgtagccgc
tcagtcgaacgttcgcgtgactacagaagagaccaagacagggatcgtagagaccgcaag
gaccgcggaaaagatcgtgaatccgaacgagatcgaagcaaaagaggcgaagatcgtgac
aaatacaacaacaaaaagaaagatagcaaaaagagtagcagtagcagtgctgccatcgat
cctgaaattgcagaagcgaatgccttgcgagctaagttggggctggctcctttgcgaccg
taa
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