KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_199058
Entry
DAPPUDRAFT_199058 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DAPPUDRAFT_199058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpx03041]
    DAPPUDRAFT_199058
Spliceosome [BR:dpx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    DAPPUDRAFT_199058
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    DAPPUDRAFT_199058
SSDB
Motif
Pfam: PRP38 PRP38_assoc SWAP1_C HIND SRP-alpha_N
Other DBs
NCBI-ProteinID: EFX76307
JGI: Dappu1_199058
UniProt: E9GW90
LinkDB
Position
Unknown
AA seq 360 aa
MANRTIKEAISVKGTNPQYLVEKIIRTRIYDSKYWKEECFALTAELMVDKAMELRYIGGI
FGGNVKPTPFLSLTLKMLQIQPEKDIVVEFIKNEDFKYVRALGAFYMRLVGTSVEIYKYL
EPLYNDYRKIRFQNKEGNFELLYMDDFIDSLLREERFCDVILPRLQKRQILEEANEVEPR
VSALEEDLEEEDSESEEEEGERKGGSLSPPPTTSRSKQDSDRERERSRRNRDKERERERS
RERRDRHRDRSRSREKRNRSRERDRDRSRERDRSRRQRSRSVERSRDYRRDQDRDRRDRK
DRGKDRESERDRSKRGEDRDKYNNKKKDSKKSSSSSAAIDPEIAEANALRAKLGLAPLRP
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggctaatcgaacaatcaaagaggccatttctgttaaaggaacaaatcctcaatacttg
gttgaaaagattattagaactcgaatttatgattcaaagtactggaaagaagaatgcttt
gctttgacggctgagttgatggtggataaggccatggaattaaggtacattggtggaata
tttggtggcaatgttaaacctactccatttctctcacttacacttaaaatgcttcaaatc
caaccagaaaaagacattgtagtagagtttataaaaaatgaagatttcaaatatgtccgt
gccttgggagcattctacatgagacttgttggaacatctgtggaaatctataaatattta
gaaccactttacaatgattacagaaaaattcggtttcaaaacaaggaaggaaattttgag
cttctttatatggatgatttcattgatagtttactgagagaagagcgtttttgtgatgtt
atcctgcccagacttcagaaacgtcaaattctggaagaagctaatgaagttgagccgaga
gtatcagctttggaagaagacttggaggaagaagattcagaaagtgaagaagaagaaggt
gaaaggaaaggaggttcgttgtcgccccctcctactacatcgcgttcaaagcaggacagt
gatcgagaacgggagcgttctcgtcgtaatagggataaagaacgtgaacgagagagaagt
agggaaagacgtgatcgacatagagacagaagtcgaagtcgtgaaaaaaggaatcgcagc
cgtgagcgtgacagggaccgcagtcgtgaaagagatcgaagtcgccgtcagcgtagccgc
tcagtcgaacgttcgcgtgactacagaagagaccaagacagggatcgtagagaccgcaag
gaccgcggaaaagatcgtgaatccgaacgagatcgaagcaaaagaggcgaagatcgtgac
aaatacaacaacaaaaagaaagatagcaaaaagagtagcagtagcagtgctgccatcgat
cctgaaattgcagaagcgaatgccttgcgagctaagttggggctggctcctttgcgaccg
taa

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