Daphnia pulex (common water flea): DAPPUDRAFT_202413
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Entry
DAPPUDRAFT_202413 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
DAPPUDRAFT_202413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpx04121
]
DAPPUDRAFT_202413
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_202413
Enzymes [BR:
dpx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
DAPPUDRAFT_202413
Ubiquitin system [BR:
dpx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
DAPPUDRAFT_202413
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
DAPPUDRAFT_202413
Noncanonical PRC1 (PRC1.1)
DAPPUDRAFT_202413
Noncanonical PRC1 (PRC1.3/1.5)
DAPPUDRAFT_202413
Noncanonical PRC1 (PRC1.6)
DAPPUDRAFT_202413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-Nse
RING_XB3-XBAT31
zf-RING_5
zf-RING_6
zf-RING_4
zf-rbx1
zf-UDP
TRAF3_RING
Sina_RING
zf-C3HC4_5
zf-ANAPC11
Motif
Other DBs
NCBI-ProteinID:
EFX70340
JGI:
Dappu1_202413
UniProt:
E9HD64
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MASVDASGANKSWELSLYELQRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKNTMTT
KECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDMLIAKIYPSRDEYEAHQ
ERVLANLSKSHSQSALLNSIEEGMKIQSQNRATRIRKNAPENETANSITTTPNVSAPSTP
TPTESVPSSKKKPKLSTNLSENESTGSGAEGPSDHGATEKLCEEQSGPSCSGGKSFNEIE
LVFKPHPVEMGNDNDLIKALKENSIRYIKTTSNATVEHLSKYLAMRLTLDLESEIPDSLT
NFCIYISPGPNQFVVLSGMQTLDDVNEKYWKSNQPLEMFYSWKKSSV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgttgatgcatctggcgctaacaaatcatgggaattatcactgtacgagcta
caacgaacgcctcaagaagctattaccgacaacaccgaaattgctgtttcacccagaagt
ctccacagtgagctcatgtgtcccatatgcctcgacatgttgaaaaacaccatgaccacc
aaggaatgcttacacaggttttgctctgactgcatcatcacagctctgcgatctggaaat
aaagagtgcccaacatgccgcaagaagctagtttcaaaacgttcactcagaccagatcca
aactttgacatgctcattgccaaaatctaccccagccgtgacgaatatgaagcacaccaa
gagagagtactagccaacctcagcaaaagtcactcacagtcagccctgctaaattccatt
gaagaaggaatgaagatccaatctcaaaacagggctaccagaatcagaaagaacgcacca
gaaaatgagacagccaattctataacaaccacgccaaatgtcagtgctccttccactcct
actccaacagaatctgtgccctcatcaaagaagaaaccaaaattatctactaatttatct
gaaaatgaatctactggctcaggagctgaagggccaagcgatcacggtgctactgaaaaa
ctatgcgaagagcaaagcggaccttcgtgttccggtggcaaatcatttaacgagattgag
ttggtattcaaaccgcatccagttgaaatgggaaacgacaatgatctgattaaagccctc
aaagaaaattccatcagatatatcaaaacaacatcaaacgctacagttgaacacctgagc
aaatatcttgccatgagattgactctggatctggaatctgaaataccggattcgctcact
aacttttgtatttacatctcaccgggccccaatcagttcgtcgttctcagtgggatgcaa
acactggatgacgtcaacgagaaatactggaaatccaaccagccattagagatgttttat
tcgtggaagaagtccagcgtttaa
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integrated database retrieval system