Daphnia pulex (common water flea): DAPPUDRAFT_207797
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Entry
DAPPUDRAFT_207797 CDS
T04347
Name
(GenBank) RAD54B meiotic recombination protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DAPPUDRAFT_207797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_207797
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
DAPPUDRAFT_207797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ZGRF1-like_N
Motif
Other DBs
NCBI-ProteinID:
EFX87055
JGI:
Dappu1_207797
UniProt:
E9FZG8
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MRRSLAPSQLGGTPAAKRLRIDNVGGTSLIDGLTNASCFDPSKKVNTQRSSQDVLELLEN
NPKSMGPMKNNEPQLLIEKNVMKPVDGVKQYSVFWCQATMKKNKNWEEEAVLVVKDRGVI
LKDMKGKEIGKANGYRLAQLEELAYGSVLKVGGREVLIQDPIVESSGLSGTSSGQISSVI
KSKVEVKSAFSSNYRPPQKEVTRNLNSPQINQSQCAPLQKLRSSQDVLELLGNNKKNEDS
AENASHRVLVEKNPSLLEAVKQYNVFWCKASTKKHKNWEEEAVLVVKDRGVILKNMAGKE
IGRATGFKLAQLQELENGKILKVGGREVLIQDEIVDTAGVSGNGSSQNSCETKSQTSSRL
SNKEFVPPLLKAGHIAPKINQGVNEIKPRYNPNHPSALVMPRPPTDIQWKESQRGTVIVD
VVVDPTLSKNLRPHQREGVVFMYECLMGFKTPNMYGAILADEMGLGKTLQCITLIWILLQ
QGPYNGRPIIQRVLIVTPSSLVKNWEKEFRRWLGRERITVFTADQQNRPIEFLKHLVSPV
MVVSYEMLVRCFDEIQQINFDMVVCDEGHRLKNAGNKTSSLLSQLDTNRKVLLTGTPVQN
DLKEFFSLADFVNPGILGSLSSFRRTYEEPIVALQQPECDEDQRELGESCASELSHLTSQ
FVLRRTQEVMNAHLPPKVESVIFCKPTCVQVNLYRNVLDSSAVRSILSSTQTGNDQLSFI
LALRKLCNHPTLFAATRKHAECSELWQENYKEDSSQIQSRDASGKFVVTFAILDSLMKNT
KEKIILVSYSTKMLDLFGESCTERKYSFVRLDGSTPTNTRMGIVDRFNDPQGADRVFLLS
SKAGGVGLNLIGASRLILYDIDWNPANDMQAMARIWREGQKRTVQIYRLLTTGTIEEKIF
QRQILKQGLSGAIVDARDSTQGHFTREELKDLFTLREDTDCDTHDLISCQCTQKGVSPIP
PELDDYDFDLDDDRDCQLGTPCNKKKESHKTVDQLMDWQHF
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggtcacttgctccatcacaacttggaggtaccccagcagcaaaacgtctaagg
atcgacaatgttggaggaacttcgttaattgatggccttaccaatgcatcatgttttgat
ccttcaaaaaaggttaacacacaaagaagctcacaagatgttctggaacttttggaaaat
aaccccaaaagtatgggtccaatgaagaataatgaaccccaattgctcattgaaaagaat
gttatgaaaccagtggatggtgtcaaacagtacagtgtattttggtgccaagctactatg
aagaaaaataagaactgggaagaagaagctgttctggttgtgaaagacaggggagtgatt
ctaaaggacatgaaaggaaaagaaattggcaaagcaaatggttatagacttgcgcaactt
gaggaactcgcatatgggagtgtattgaaagttggtggtcgagaagttcttatccaggac
ccaattgttgagtcttccggtttgagcggtaccagttcgggtcaaatttcgtctgtgatt
aaatcaaaagtagaagtaaaatccgctttttcttcaaattaccgtcctcctcaaaaagaa
gtaacgcggaacctaaattcacctcagataaatcaatctcagtgtgcacctttgcaaaaa
ctgagaagttcacaagatgttctggaacttttaggaaataacaagaaaaacgaagattct
gcagaaaacgcctcacaccgagtgcttgttgagaagaatccatcgttactggaagctgta
aaacagtataatgtattttggtgcaaagcttcgacgaaaaagcacaagaattgggaagaa
gaagctgtcctggttgtgaaagatagaggagttattcttaagaacatggcggggaaagaa
attggtcgagctacaggattcaaacttgcgcaacttcaagagctcgaaaacggaaagata
ttaaaagttggtggaagagaagttttgattcaagatgaaattgttgatactgccggcgtg
agtgggaatggttctagccaaaattcttgtgagactaaatcacaaacaagttctcgtcta
tcaaacaaagaatttgtgcctcctttacttaaagctggacatatagcgcccaagattaat
caaggagtgaacgaaatcaaacccagatacaaccctaaccacccttcagctctggtcatg
cctcggccgcctactgacattcagtggaaagaatcgcaacgtgggacagtcatcgttgac
gttgttgtggatccgacgcttagcaagaatcttcgtcctcatcagcgtgagggtgtggtt
ttcatgtatgaatgtttgatgggcttcaaaacaccaaacatgtacggagctatattagcc
gacgaaatgggtctgggtaaaacattgcaatgtataactctcatatggattttacttcag
caaggtccttataatggacgaccgataattcaacgtgttttgatcgttacaccgtcaagt
ttggtcaaaaattgggaaaaagaatttcgtcgttggttaggtcgagagcggataactgtt
tttactgctgatcagcaaaatcgaccgatagagtttttgaaacatcttgtatcccccgtc
atggtggtgtcgtatgaaatgctagtccgctgctttgatgaaatacagcaaattaatttt
gatatggttgtttgcgacgaaggacatcgattaaagaatgcgggcaataaaacatcatcg
ctgctctcacaactagatactaacaggaaagtcctgttgactggaacccctgttcaaaat
gatttgaaagaatttttttccttggctgactttgtcaatcctggcattttaggaagctta
tcttcatttcgccgaacctatgaggaaccaatcgtcgctcttcaacagcctgaatgcgat
gaggatcaacgggagcttggtgaaagctgcgcatccgagctaagtcacttaacatcacag
tttgttttacgtcgcactcaggaagtcatgaacgcccatctacctccaaaagtagaaagc
gtcatcttttgtaaaccgacatgtgttcaagtgaacttgtatcgcaatgtgctggattca
tcagcggtccgttcaattctttcatctacacagactggtaacgatcagttatcattcatc
cttgcgttgcgcaaactgtgcaatcatcccacactattcgcggcaacgagaaaacatgct
gagtgctcagagttatggcaagaaaattacaaagaggatagttcccaaatccaatctcgt
gatgcatcaggaaaatttgtagttacatttgctattctggattctcttatgaaaaatacc
aaagagaaaatcattttagtttcctactcgacaaagatgctagatctttttggcgagtct
tgcactgagcggaaatacagctttgtcagattagatggaagcactccaactaatacccga
atgggaattgttgatcgatttaacgaccctcaaggagctgatcgagtttttttattgagt
tcgaaggccggtggagtaggtttaaatttgatcggggcatcacgacttatcctttatgat
atagattggaacccagcaaatgacatgcaagcgatggctcgaatttggcgagaaggacag
aaaaggacggtacaaatttacagattgctcacgactggaacaattgaagaaaaaattttc
cagcgacaaattcttaagcaaggattgagtggtgctatcgttgatgctcgagactctacg
caaggccatttcactagagaagaactcaaggacctgtttactctgagggaagacactgat
tgcgacactcatgatctaatcagttgccagtgcactcagaaaggagtaagcccaattcct
cctgaattagacgactatgattttgatttagacgatgatcgcgactgtcagcttggcact
ccttgcaacaaaaagaaagaatcgcacaaaaccgtcgatcagctcatggattggcagcat
ttc
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