Daphnia pulex (common water flea): DAPPUDRAFT_216243
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Entry
DAPPUDRAFT_216243 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_216243
Enzymes [BR:
dpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DAPPUDRAFT_216243
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DAPPUDRAFT_216243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_19
AAA_30
Helicase_PWI
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
EFX72172
JGI:
Dappu1_216243
UniProt:
E9H7W7
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
MNVLCSSKSDDELQTEFFDLLGFERFELIQELLEHRKEMKKAEKSIATQVAMASSKPKPY
PAGPIISGQVLVQSAQEKDLMKQVRREEKRFQKLRQGYENDVEEASSMKMFQEQQLVMAS
TLPIMKHSASKAIKYPNVYDSIAEAKQSSSFVGGKKMALPESAVRTNTAKYEEINIPLSE
PAPTEVGNQLIPIASLDDISRKAFGNCKNLNKIQSVVFETAYRTNENMLVCAPTGAGKTN
IAMLTILHQIKQYITNGVLERKDQFKIVYVAPMKALAAEMAENFGKRLAPLGLLVRELTG
DMQLTKAEIMATQMLITTPEKWDVITRKSTGDIALTQLVKLLIIDEVHLLHGDRGPVVEA
LVARTLRQVESSQMMIRILGLSATLPNYVDVAQFLHVNPYKGLFYFDSRFRPVPLSQTFI
GVKEVNPMRQMQQMDFVCFDKVAAMVQQGHQVMVFVHARNATLKTAQTLRMIAQEKNQLH
LFQPEDNSGFSTAMRTAGKSRNRHLVDLFKDGFAIHHAGMLRSDRNLVEKMFADGMARVL
VCTATLAWGVNLPAHAVIIKGTEIYDAKHGAFVDIGILDVLQIFGRAGRPQFDKSGHGTI
ITSHDKLAHYLSLLTCQYPIESSFEKSMTDNLNAEITLGTVANVDEAVQWLSYTYLFIRM
RKNPIAYGINLDQIFDDPHLGGKRRELIVMAARSLDKARMIRFEEKTGLLHATDLGRTAS
HFYIKYDTVEIFNEQMHQAMNDAEIFALISMATEFDQLKVRDDELDELDDYLHTYCELPV
SGGSENIHGKVNILMQTYVSRGSVNSFSLISDQSFIAQNSSRIARALFEIVLRKNWPLMS
GRVLRVSNMIEQRVWDSQHPLRQFGTLGQDIIIKLEEKKLSLERLREMDSKEIGFMIQNQ
RSGPIVKRNASEFPYLDVEATVQPITRTVLRIRLSIRPDFRWNDRIHGLSSEPYWMWVED
PENNTTYHYESISLGKKQVTRKEEQVIVFTIPIFEPLPSQYYIRIVSDRWLRCETTYPIS
FQHLILPERHPPHTGLLDLKPLPVTALKNPEWQSLYSFPYFNPIQTQLFHVLYHTDHNVL
LGAPTGSGKTIVAEIAMFRVFREYPKAKVVYIAPMKALVRERMDDWRERLGRRLGKNVVE
LTGDVTPDVRAISRADVIVTTPEKWDGVSRSWQTRDYVRAVALIIIDEIHLLGEDRGPVL
EVIVSRTNFIASHTGRSLRLIGLSTAVANARDLADWLNIGQVGLFNFRPSVRPVPLEVHI
SGFPGKHYCPRMATMNKPTFQAIKQHSPDKPVLVFVSSRRQTRLTALDLIGYLAAEDSPR
QFVRMPERDMEQLTISIRDPNLKLTLSFGVGIHHAGLTEKDRRLVEELFVNQKIQVLIAT
ATLAWGVNFPAHLVVIKGTEYYDGKSRRYVDMPITDVLQMMGRAGRPQYDDHGVACVLVH
DIKKDFYKKFLYEPFPVESSLLDVLPEHLNAEIVAGTICSKQDAIDYLTWTYFFRRLLQN
PAYYGLEQLEPTDVNHYLTSLIHRSLSVLEAASCLEIEDEGGRVAPTSLGRIASYYYLSY
HTLQLFRDRLGHETKLEDLLSILSDAHEYNELPVRHNEDLLNAELAKKCLLPVNPYTYDS
SHTKAHLLFQSHFSRLSLPCADYVTDTKSVLDQAIRILQAMMDVAAEGGWLATTLRIQQL
LQMVIQAMWIEDPAILMLPHFDSFILPVLRSSQEPLTFLPVLQKAFAVDCAKMCNLLATD
FSPDQIQEVRQVLSNLPVIDIAMSVQFGTTSVPLSIIPNCGLQETVWIDVPADQECLLDV
TFTRQSLNRTVYAPKFPKPKDEGWFLTLGSIEKQELLALKRVTLPRVKCTQQLSFTTPAR
LGRLMLTLYFMSDSYLGLDQQYNVHLNVCKAKPKECDDDYETNNDF
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttttgtgctctagtaaatcggatgatgaattacaaacggagttctttgatttg
ctgggatttgaacgatttgaactgatacaagagctcttggaacataggaaggaaatgaag
aaagcagaaaaatcgattgccactcaggttgccatggcctcatccaaacctaaaccttat
cctgctggccccattatcagtgggcaagtgcttgttcaatctgcccaggaaaaggatttg
atgaagcaggttcgaagagaggaaaagcgatttcagaagttacgtcaaggatacgagaat
gacgtagaagaggcgtcatcgatgaaaatgttccaagagcaacagttggtcatggcttcg
acccttcctattatgaaacattccgcgagtaaagcaatcaaatatcccaacgtttacgat
tcaatagcagaggcgaaacaatcttcatctttcgttggtgggaagaaaatggcgttgcca
gagtctgcggtgcgtaccaacaccgcaaaatatgaggaaatcaacattcctctatcagaa
ccagcaccaactgaagtaggaaaccaattaattcccatcgcttcactggatgacataagt
cgaaaggcattcggcaactgcaaaaatctcaacaagattcagagcgtagtatttgaaacc
gcttaccgaactaatgaaaacatgttagtttgcgctccgaccggagccggtaaaacgaac
attgctatgttgacaattttgcatcaaatcaagcagtacatcactaacggagtccttgaa
agaaaagatcagtttaagattgtgtatgtggcgcccatgaaagctttagcagccgagatg
gcagagaatttcgggaaacgcttggccccactgggtctgctagtgcgtgagttgacgggt
gacatgcagttgaccaaggccgaaatcatggccacacagatgctcatcacaacacccgaa
aagtgggatgttattaccaggaaaagcactggtgacattgcattgacgcagttagtaaaa
ttactaattatcgacgaagttcacttacttcacggcgatcgtggtcccgtagttgaagct
cttgtggcccgcacgctgcgccaggttgaatcgtcccagatgatgattcgaatcttgggt
ctttcggccacattgcccaattacgttgacgtagcgcaattcctgcacgtcaatccatac
aagggactcttttactttgattcgcgcttccgacctgtgcctttatctcaaacattcatc
ggtgtgaaggaggttaatcccatgcgacaaatgcaacagatggatttcgtctgttttgat
aaggtcgccgccatggtacaacagggacatcaggttatggtgtttgtccatgcccgtaac
gccactctgaagacagcccagactttaaggatgatcgcgcaggaaaaaaatcagttacat
ttattccagccagaagataatagtggattcagcaccgccatgagaacggcagggaaatcg
aggaataggcatcttgtcgacttgttcaaagacggtttcgcaattcatcacgccggaatg
ctgaggagtgatcgaaaccttgtggagaaaatgtttgccgacggaatggcgcgagtcctg
gtttgcacagctactttggcatggggtgtaaacttgcctgctcacgcagtcatcatcaaa
ggaaccgagatttacgacgctaaacacggagcctttgtcgatatcggcatcttggatgtt
ttgcagatctttggtagagctggtcgaccccaatttgacaaatcaggacacggaactatc
atcacatcccacgacaagttagcccactacctctcgttgctgacgtgccaatatcccatc
gagagcagctttgaaaaatccatgacagacaacctaaacgctgaaattacgctcggaacg
gttgcaaatgttgacgaagccgtccagtggctaagttacacctacctgttcattcggatg
aggaaaaaccctatcgcttacggcatcaacctggatcagatatttgacgatccccacttg
ggaggaaaacgccgagaattgatcgttatggctgcccgatccttggataaagctcgaatg
atccgcttcgaagaaaagactggattgttgcacgccaccgatttgggtcgaaccgctagc
cacttttacatcaaatacgacacagtcgagattttcaacgagcaaatgcatcaagctatg
aatgatgccgaaattttcgccctcatctccatggcaactgagtttgaccaactcaaagtg
cgtgatgacgagctggatgagcttgacgactatctccatacttactgcgaattgcctgtc
agcggcgggagcgagaatattcacggcaaagtcaacattttgatgcagacttacgtctcg
cgtggatccgtcaactcgtttagtttaatttccgatcagtcgttcatcgcccaaaactcg
tctcgtattgctcgagctcttttcgagattgttttgcgcaaaaattggccattaatgtcc
ggtagagttcttcgggtttccaatatgattgagcaacgagtttgggactctcagcatccg
ttgcgccaatttggcactctcggccaagatatcatcatcaagttggaagagaaaaagcta
tcgcttgaacgactgcgcgagatggacagcaaagagattggatttatgattcaaaatcaa
agatcaggcccaattgttaagcggaatgcatccgagttcccttacctggatgtagaggct
acggttcaacccatcacgcgaacggtgttgcgaattcgactcagcatccgacccgatttt
cgctggaacgacagaattcacggtctttcgtcggagccgtattggatgtgggtagaggat
cctgaaaacaacacgacatatcattacgaatccatttcgctgggaaagaaacaagtgaca
cgcaaggaggagcaagtgattgtcttcaccatcccaatctttgagccgctaccgtcgcag
tactacatccgcattgtcagcgaccgttggctccgctgcgaaaccacttatccaatctcg
ttccagcatctcatcctacccgaacgccatccgccacacaccggtctgttggacctgaaa
ccgttgcccgtcactgcgttaaagaatccagagtggcaaagtctctactcgttcccctat
ttcaaccccattcaaacgcaacttttccacgtcttgtatcacacggatcataatgtcttg
ctgggcgcacccactggttcgggaaaaaccattgttgccgaaatcgccatgttccgtgtc
tttcgggaatacccaaaagccaaagttgtttatatcgccccgatgaaagcgctagtgcgg
gagcggatggatgattggcgagagcgcctaggccgccgattgggcaaaaatgtcgtcgag
ttgacgggtgatgtcacacctgacgtcagggccatcagccgggctgatgtgatcgtcacg
actcctgagaaatgggatggtgttagtcgatcttggcagactcgcgattacgtccgcgct
gtagcgctaatcatcatcgacgaaatccatttgctgggagaagatcgcggtccagtcctg
gaggtcatcgtctcccgtacaaacttcatcgcgtcacacactggtcgctctttgcgcctt
atcggcctgtccactgccgttgccaatgctcgcgatttggccgattggctcaacattggt
caagttggtctcttcaattttcgaccctccgtccgtcccgttccgttggaagttcacatt
tccgggttccccggtaagcactattgccctcgcatggccacgatgaataaacccacgttc
caggccatcaagcagcattctccagacaagccggtgttggtatttgtctcgtctcgacgt
caaacacggttgactgccctggacctgatcggttatctagcggcagaggatagccctcga
cagtttgttcgtatgccagagcgagacatggagcagctcaccatttccatccgagatcca
aatctcaagttgactctctctttcggtgtcggcatccatcacgccggtctgacagagaag
gatcgccgtttagtggaggaattgtttgtcaaccaaaaaattcaagttctcattgcgacg
gctaccttagcctggggtgtcaattttcctgcccatttggtcgttatcaagggcacggaa
tactacgacggaaaatcgcgtcgttacgtcgacatgccaatcacagatgtattgcagatg
atgggtcgcgcgggacgaccacagtatgatgatcacggagtcgcctgtgtccttgtgcac
gacatcaagaaagatttttataaaaagtttttgtacgaaccatttcctgtcgaatccagt
ttgctggatgtgctgccggaacatttgaacgccgaaattgtggctggcacgatttgctcc
aaacaagatgcaattgactacctgacttggacgtatttcttccggcgattgctccaaaac
ccggcctattacggactggaacaactggaacctaccgatgtcaaccattatctgacgtcg
ctcattcatcgctccctctcggtcctggaagccgcttcgtgtcttgaaatagaggacgaa
ggtggccgcgttgcacccacttcactcggccggatcgcttcctattattacctgagctac
cacacgttgcagttgtttcgcgatcgattgggtcacgaaacgaaactcgaagatctttta
tccattttgagtgatgctcacgaatataacgaacttcccgttcgccataacgaggacctg
ctcaatgccgaattggccaagaaatgccttttgcccgtcaacccttacacgtacgattca
tcgcacaccaaggcccatttgctcttccagtcacatttttcgcgcttgagtttgccctgc
gccgactacgtcacggacaccaaatcggtgctggatcaagcgatccgaatcttgcaagcc
atgatggatgtggcggccgaaggcggttggctggcaaccactttgcgtatccaacagtta
ctccagatggtgattcaagcgatgtggattgaagacccagccattctcatgcttccacac
tttgattctttcatcttgcccgtccttcgatcttctcaagaacctctgacgttcttgccc
gtcttgcaaaaagcctttgctgtcgactgtgcgaaaatgtgcaatctactggccaccgat
ttcagcccggatcaaatccaggaagtccgtcaagttctttcaaatttacccgtcatcgac
attgcaatgtctgtccagtttggaacgacatcggtgcccttgtccattatccccaactgc
gggcttcaagagaccgtatggattgacgtacccgcagatcaagagtgccttctggatgtc
actttcactcgccagagccttaaccggactgtttacgctcccaaatttcccaaacccaaa
gacgagggttggtttctaaccctgggatcgatcgaaaaacaggagttgctagcgctgaaa
cgcgtgactttgcctagagtgaagtgcacgcaacagctgagtttcacgacccccgcaaga
ctcggccgcttgatgttgacattgtatttcatgtcggacagctacctcggcctggaccag
caatataatgtccacctcaacgtctgtaaagccaaacccaaggaatgtgatgacgattac
gagacaaataacgacttctaa
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