Daphnia pulex (common water flea): DAPPUDRAFT_221227
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Entry
DAPPUDRAFT_221227 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K10980
non-homologous end-joining factor 1
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DAPPUDRAFT_221227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_221227
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
DAPPUDRAFT_221227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
FtsK_SpoIIIE_N
Motif
Other DBs
NCBI-ProteinID:
EFX88325
JGI:
Dappu1_221227
UniProt:
E9FX44
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MDALGWFVIGSEGYAVRAESDDENFVIYLTDMTSIWCERQTATEIMKRCQDLNPLIESTV
KHLIQQLRSTLLISHSESNSLTIVSVDQNITLKLESHLDGNLPFSWEFHLTLETTDQFKS
FIIRPLLAMLREAACVEEELCNIIRSKDKQIDDYKASGATVSRRHLETKEFNAETFFASR
ITRTIEESAKEKITSLFCRVVDRLKQLYSVVVERIYFQSSARRSALTVPDVSAEMTEEIP
DRGRTSTQSPAKESEESRSEAIKKRLREEEQKEMAKRAKKACLAKIL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcttggatggttcgtaattggctcagaaggatatgcagtaagagcagagtcg
gacgacgagaattttgtcatttacctcactgatatgacttcaatttggtgtgaacgacaa
acagctactgagattatgaaacggtgtcaggatttaaaccctttaatcgagtcgacagta
aaacatctgatccaacaacttcgcagcacattgctaattagccattcggagagtaatagt
ctaacgatagtttcagttgatcaaaacatcacattgaaactagaatctcacttggacggt
aatctacccttttcttgggaatttcatttgactttggaaaccactgatcagtttaaatct
tttataattcgtccattgctggcaatgctaagagaagcagcttgcgtcgaagaagagctt
tgcaacatcatccgaagtaaagataagcaaattgacgactacaaagcttcaggcgcaacc
gtatcccgccgtcacttggaaaccaaagaattcaacgcggaaaccttcttcgcttcacgt
ataacgcgcactattgaagagagtgccaaagaaaaaattacatctctgttctgtagagtt
gttgatagattaaaacagttgtattcggttgttgtcgaaaggatttatttccaaagttca
gcacgtcgctcagctttaactgttccagacgtatctgcagaaatgacagaagagattccg
gacagaggacgaacttcaacacaatcaccagccaaagagagtgaagagagccgatcagaa
gccattaaaaagcgattacgtgaagaagaacagaaggagatggccaaaagagctaaaaag
gcgtgtttagcaaaaatattgtaa
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