Daphnia pulex (common water flea): DAPPUDRAFT_223699
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Entry
DAPPUDRAFT_223699 CDS
T04347
Name
(GenBank) putative Tif-IA
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpx03021
]
DAPPUDRAFT_223699
Transcription machinery [BR:
dpx03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
DAPPUDRAFT_223699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
RIX1
Motif
Other DBs
NCBI-ProteinID:
EFX82637
JGI:
Dappu1_223699
UniProt:
E9GCY8
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MASTNCSQLTPIPQSILKPSSRISMQPKKLSQPLQVRFDSLVTIDVVSILKDYIEGRSEV
KYHQLLNLKNDPNVNDGFLLLILQQVNSSISLLTPKVDSFVDALLHISWTTRQPSVLDEY
VTFLQTLVSAHTFYCRPVVRMLVSHLTLHSDCEKSTSNVHLVLRGILQLIPLSQSIIWDS
LNDGFPYIGSSSCNQVNYIRNLLRFVEYHEMSGPRVLHLIIGRIIKLDSRVSREDLLQKF
NQPMEFDEDTVLNQASETLDEIMKVMFELCHRKCHSEWNVHRNFYQDMYATFESLILPAA
GIHHVHYLMFYICSTKTALYEAFTERLWVIFLTPSSQLNIRKSCADYLASFLGRASFVPM
KYVIDCLDRVCQWIHAYLDRQSKGEGAAVFKIRAHAAFYAACHIPFYVVAARHRDIVNDR
KLLARLQALDLNRIVNSPLNPLRYCHATTVRQFAESASHLQVVFCHTIMIRNQRVCIPEA
TTDTFVMDTEYPFEKYLLPSSMDFVSPLVIDKPIGRDDSLYDSDQVMEELLSESPRVGGF
MHHFMG
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtacgaattgctcccagttgactcccataccacagtccatattgaaacccagt
tcgcgaatcagtatgcaacccaagaaactgtcccagcctttgcaagtccgatttgactcc
ttggtcacaattgacgtggtttcaattttgaaggattatatcgaagggcgaagcgaagtg
aaatatcaccaattattgaatctgaaaaatgatcctaatgtcaatgatggatttttactc
ttgattcttcaacaagtaaacagctctatcagtctgctgactccaaaagttgattccttt
gttgatgcattgctgcatatttcatggacaacaagacagccctcagtacttgatgaatat
gtgacatttctccaaacactagtttcagcacacacattctactgtagaccagtagttaga
atgctagtctcacatctgacactccattcagactgtgaaaaatctacatcgaatgttcat
cttgttttgaggggaatactgcagcttataccattgtctcaaagtattatttgggattcc
ttaaatgacggttttccctacattggatcaagcagttgtaatcaagtaaactacatcaga
aatcttcttcgttttgttgaataccatgaaatgtctggcccccgtgttttacatctcatc
attggaagaatcattaaattggacagcagagtttccagagaggacttgcttcaaaaattc
aatcagcctatggagtttgatgaggatacagtcttaaatcaagcttctgaaacgttagac
gaaatcatgaaagttatgtttgagttgtgccatcgcaaatgtcatagcgaatggaatgtt
catcgaaatttttatcaggacatgtacgctacgttcgaatctttgatactaccggccgcc
ggtatccatcatgtccattacttgatgttctacatctgtagtaccaaaactgctctctat
gaagcttttactgagcgcttgtgggtcatttttcttaccccttcatctcagttgaatatt
cgaaaatcgtgtgccgattaccttgcttcgtttttggggagagcctcttttgtacccatg
aagtacgtcattgactgtctggatcgagtgtgtcagtggattcacgcatacctcgatcgg
caatcaaagggtgaaggagcagctgtttttaaaatccgagcccatgcagcattctatgcc
gcttgtcatattcccttctacgtagtggctgctaggcatcgagatatcgtcaacgacaga
aagcttctcgcccgattgcaagccctggatttgaaccgaattgtcaactcacctttgaac
cccttacgctattgtcacgctacaactgtcagacaattcgcagaatccgcttcacatctg
caggttgtattctgtcacaccatcatgattcgtaatcaaagggtttgtatacctgaagct
acaaccgacacatttgtcatggatacagaatatccattcgagaaatacctcttgccctcg
tcaatggattttgtgtcacctcttgttattgacaaacctatcggtcgtgacgattcactt
tacgacagcgatcaggttatggaagagcttttgtctgaatcaccaagagttggcggcttt
atgcaccatttcatgggttga
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