Daphnia pulex (common water flea): DAPPUDRAFT_225597
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Entry
DAPPUDRAFT_225597 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K13114
pinin
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03013
Nucleocytoplasmic transport
dpx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DAPPUDRAFT_225597
03015 mRNA surveillance pathway
DAPPUDRAFT_225597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_225597
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_225597
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
DAPPUDRAFT_225597
Spliceosome [BR:
dpx03041
]
Complex C
Other components
EJC/TREX
DAPPUDRAFT_225597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
HgmA_C
BAH
FlaC_arch
Csx1_CARF
Motif
Other DBs
NCBI-ProteinID:
EFX77618
JGI:
Dappu1_225597
UniProt:
E9GS06
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MAVAVENFQAELEKARETLNKVDENIKKITGRDPTEARNARFQSQVGNNEGRENAQARNR
IPPRFQGRLSSRDEQEKRHDGPTHTKRIVREGNDGRPTPLVAIGNPKGWRNDDYEEGELP
RKGAIHSSITAPNADRKTREEALAQQSKDVKVKDRNRRMFGSLLGTLAKFRMEESSQKDK
EEKRARIEQRLEETARQEKESLRKERNELFMERKRQQAHVRRLEWKMHRLREHDEWATRQ
QPLMKFIKLTTTPPLYYKPKVWTPKTEELLKESQRKLKEMLETRRKELEEELLRVEEKAI
ARLERVRERGYRVAPASEQDAELEELEAEIEMYALALGEEKEEDMELHPEKVSQGPLTFP
KHDPDEPMDSA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgctgttgagaattttcaagccgaacttgaaaaagcacgtgaaacacttaat
aaagtcgatgaaaatatcaagaaaataactggaagagatccaacagaggccagaaatgcc
aggtttcagtctcaagttggcaataacgaaggacgagaaaatgcacaggcacgaaaccga
attcccccacggtttcaaggaagactgtcgtccagagatgaacaggaaaagaggcatgat
ggcccaactcacactaaaagaatagttagagaaggaaatgatggcaggcctactccattg
gttgctattggaaatccaaaaggttggagaaatgatgactatgaagaaggagaactacca
cgcaaaggtgccattcactctagcatcacagctccaaatgcagacagaaagacaagagaa
gaggccctagcccagcaaagcaaagatgttaaagtcaaagacagaaatcgaagaatgttt
ggttcattattaggaacattggccaaattcaggatggaagaatcatcacagaaagataaa
gaagaaaaacgggccagaattgaacaaagattagaggagaccgcacgccaggagaaagag
agtctgagaaaagagcgaaatgaactcttcatggagcgtaagagacaacaggcacatgtc
aggagactggaatggaagatgcatcgtctaagagaacacgatgaatgggcaactcgtcaa
caaccgctgatgaagtttatcaaattaacgacaactcctccattatactacaagcctaaa
gtttggactccaaaaacagaggaattactcaaggaaagtcagcgtaaactcaaagaaatg
ctcgagactcggcgaaaagaactcgaggaagaattattacgagtagaagagaaggcaatc
gcccgtcttgagcgagtccgtgagcgtggatatcgtgtggcaccggctagcgagcaagat
gcggagctggaggaactggaagctgaaattgaaatgtacgctttggctcttggcgaagaa
aaggaagaagacatggaactccatccggaaaaagtcagccaaggcccactcactttcccc
aagcacgatccggacgagccaatggactctgcttga
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