KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_228373
Entry
DAPPUDRAFT_228373 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K03869  cullin 3
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    DAPPUDRAFT_228373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dpx04121]
    DAPPUDRAFT_228373
   03400 DNA repair and recombination proteins [BR:dpx03400]
    DAPPUDRAFT_228373
Ubiquitin system [BR:dpx04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul3 complex
    Cullin
     DAPPUDRAFT_228373
DNA repair and recombination proteins [BR:dpx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     DAPPUDRAFT_228373
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 WAC_Acf1_DNA_bd DUF5308
Other DBs
NCBI-ProteinID: EFX70371
JGI: Dappu1_228373
UniProt: E9HD18
LinkDB
Position
Unknown
AA seq 757 aa
MRIRAFPMTMDERYVENIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYN
GLREVVTHHLESKVRQDVLASLNNNFLQILNQAWNDHQTSMVMIRDILMYMDRVYVQQNN
VDNVYNLGLIIFRDQVVRYGGIRDHLRHILLEMVVRERKGEVADKLSVRAACQMLMVLGI
DSRAVYEEDFERPFLSQSAEFYRSESQRFLGENSASVYIKKVEARINEESERAKHYLDES
TEQRIVAVVEEELIQKHMKTIVEMENSGVVHMLKCQKTDDLHCMYKLLGRVADGLRTMAS
CVSAHLREEGKALVNVDESGANALNFVQSLLDLKDRYDTFLGKSFVNDPIFKKMISSDFE
YFLNLNLKSPEYLSLFIDDKLKKGVKGMTEQDIELVLDKTMVLFRFLQEKDIFERYYKQH
LAKRLLLNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFKDMSISNMLMEDFKNHIQTSG
TSLYGVDLSVRVLTTGFWPTQSSATCTLPLAPRNAFEVFRRFYLAKHSGRQLTLQPALGS
ADLSAIFYGPRREESETKEKADGPSSSTPTSASANGPRKHIISVSTYQMCILMLFNTRDR
LTYEDIMNETDVPKKDLDRALQSLAMGKPTQRVLVKSPKGKDILPSSIFAVNDSFTSKLH
RVKIQTVAAKGESEPERKETRSKVDEDRKHEIEAAIVRIMKARKTMQHNLLVSEVTEQLK
SRFLPSPVIIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgcgaattcgtgcattccctatgacgatggacgagaggtatgtggaaaatatttggagt
ttactgaaaaatgccattcaagaaattcagaagaagaataactctggtctcagttttgaa
gaactttaccgaaatgcatacacaatggttctacacaaacatggagagagattgtacaat
ggccttagagaagttgttactcatcatttagaatctaaagttcgtcaagatgtgctggct
tccttgaacaacaatttccttcaaattctaaatcaagcatggaatgatcatcaaacatct
atggttatgattcgtgacatcctcatgtacatggacagagtttatgttcaacaaaataat
gttgataatgtttacaatcttggattgattatttttcgtgatcaagttgttcgttatgga
ggcattcgtgaccatctaaggcatattcttttggaaatggttgtcagggagcgtaaagga
gaggttgcagataagctttctgttagagcagcttgtcaaatgctcatggtgctgggtata
gacagtcgagctgtctatgaagaggattttgaaagaccttttctttctcaatctgcagaa
ttctacaggtctgagagtcagcggtttttaggggagaattcagcttcggtttacataaag
aaagtcgaagcgcgcattaatgaagaatcggaaagagccaaacattatttggatgagtcg
accgagcagcgtattgttgcagtagttgaagaggaacttatacagaaacacatgaaaacg
attgttgagatggaaaattctggtgtagtacatatgttaaaatgccagaaaactgacgac
ttacactgcatgtacaagttgttgggtcgtgtagcggatggtttgcgaaccatggctagt
tgtgtcagcgcgcatttacgagaagaaggcaaagcattggttaatgtcgatgaatccggt
gccaatgcattgaattttgtccagagtctattagatcttaaggatcgctatgatacattt
ctggggaaatccttcgtaaacgatccaatctttaagaaaatgatctcttcagatttcgaa
tattttcttaatttgaatttgaaatctcccgaatatctatcactctttatcgatgacaag
ctcaagaagggcgttaaaggaatgacagagcaggacatagaactggtgctcgacaaaaca
atggttttgttccgttttctccaggaaaaggatattttcgagcgttattataaacaacat
ttggccaagcgcctgctgctgaacaaatctgttagcgatgatagtgagaagaacatgatt
tctaaactgaagactgaatgtgggtgtcaatttacctcgaaattagagggcatgttcaag
gatatgtctatctccaacatgctcatggaagacttcaaaaatcacattcaaacttcaggg
acctccctttacggagtggacttgagtgttcgcgtactaacaactggattctggccaaca
caatcctcagctacttgtacactaccattggcaccacgcaacgcttttgaggtctttcgc
cgattttatttagcaaagcacagtgggcgacagttgacgctacaacctgctctagggtcg
gctgatctgagcgcaatcttttatggacctagacgagaggagtctgagacaaaagaaaaa
gctgatggccccagctcgtcaacaccaacctcggcatcagctaatggaccgcgaaaacat
ataatctccgtttcaacctatcagatgtgcattcttatgctgtttaacacccgagatagg
ctaacttacgaagatatcatgaatgaaactgacgttccgaaaaaagatctggatcgtgca
ttgcaatcgcttgcgatgggcaaaccgactcaacgcgttcttgtcaaaagccccaagggt
aaagacatcctcccgagttctatctttgccgtcaacgatagtttcacgtcaaaactccac
agagtgaagatccagacagttgcagccaagggagaatcagagcctgaaagaaaagagaca
cgttccaaggtcgacgaagaccgaaaacacgaaattgaagcagccattgtacgcattatg
aaagcaagaaaaactatgcagcacaacttgttggtaagcgaagttactgaacaattgaaa
agccggtttctgccttcgccagttatcatcaagaaacgaattgaaggcttaattgaacgt
gaatatttggctcgcactcctgaggacaggaaagtgtatacatatgtggcctag

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