Daphnia pulex (common water flea): DAPPUDRAFT_228843
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Entry
DAPPUDRAFT_228843 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K23195
transcriptional repressor CTCF
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpx03000
]
DAPPUDRAFT_228843
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_228843
Transcription factors [BR:
dpx03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
DAPPUDRAFT_228843
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
DAPPUDRAFT_228843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_7th_ZNF462
zf-C2H2_ZNF142_18
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_ZNF462_11
Zf-C2H2_ZNF451_C
Actin_micro
zf-met
zf-C2H2_ZN142
zf-Di19
zf-C2H2_2
zf-C2H2_11
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-ProteinID:
EFX68989
JGI:
Dappu1_228843
UniProt:
E9HH05
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MDRMPKVGRGHKWRLVQEKGSFACSLCPYSNDLRCRLKEHYKKAHDKTIGDNECCGISFT
SKEDLKNHISTSHLHKYKCPDCDKNFTSKIVLKNHQNFVHGDSKEFKCILCEYETNYKNG
LKNHMKHKHGKRSKYMQYGSVFVKNKSLKQNAATQHHKSTTSNRYQCDICDLNFEYPSTL
LRHRNMHTKEFKCTLCKYSAARMVILMKHMKMHESDDEQSSSSTVIDNATPSSENRERTD
VEKEPIGFSRNDENEIKEQDPADPQIEDVARPEPHSSLHYRSRQENITDLENDVDMEVRS
DDSSSPSSVVGVEPPDLHPPSSSQSRPVGATPSHRLNSIQEEARQLRSQISPSTTLSGIL
SLLERLLELSASTTIEIRDSVKFEMRSQAIECFEYLWSASKMAVCVWEDIEGSMESNPSL
KAVQYAYELLPTFIKWHKIKHLEMVEHIILLSINTVKNSQHQASLIRKCKVFIAQPRYRI
SSIAGRSSVFLG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggatagaatgccaaaagtcgggaggggacacaagtggcgtttagtccaagaaaaaggc
tctttcgcctgctcactatgtccctacagcaacgatttgcggtgcaggttaaaagaacac
tataagaaagcccacgataagactatcggagataatgagtgttgcggtatcagttttacc
agcaaagaggaccttaaaaaccacatatctacaagtcatcttcataaatacaaatgtcct
gactgtgataaaaattttacttccaaaattgtactaaaaaatcatcagaactttgtccac
ggtgattccaaggaattcaaatgtatcctctgcgaatacgaaaccaactacaaaaatggt
ctgaaaaaccacatgaaacacaaacacgggaaaagatccaagtatatgcagtatggcagc
gtttttgtcaaaaacaagtccctgaaacagaacgccgcaacgcagcatcacaaaagcacc
acttcaaacaggtatcaatgcgatatatgtgatctaaactttgaatatccgtctactctc
cttcgtcaccgaaatatgcataccaaggaattcaaatgcactctctgcaaatattctgca
gcacggatggttattttaatgaaacacatgaaaatgcatgaatcagatgacgaacagtcg
tcgtcttcgacggtgattgacaatgctactcctagcagcgaaaaccgtgaacggacggat
gtcgagaaggaaccgatagggttcagtagaaatgatgaaaatgaaattaaagagcaagac
ccagctgatcctcaaatagaagacgtggcaagaccagaaccccattcatcattacattac
agatcaagacaggagaacatcactgatttagaaaatgatgtagacatggaagtgagaagc
gatgacagtagttccccttcatctgtcgtgggagttgagcctccagatttacacccacca
tcgtcaagccaatcgcggccagttggggcgactccatctcatcggctaaactcaatccag
gaagaggctcgccaactaaggtcgcaaatttcgccatcaacgaccctttctgggattctt
tctctactagagcgtttactagaactttccgcttccaccacgattgaaattcgtgattct
gtgaagtttgaaatgcgttctcaagccatcgaatgcttcgaatacttgtggagcgcttct
aaaatggcagtttgcgtctgggaagacattgaaggatcgatggaaagcaacccttccctc
aaagctgtccagtatgcatacgaattacttcctacatttattaagtggcacaagataaaa
catctcgaaatggtggaacacataattttgctcagtatcaacactgttaagaactctcaa
catcaggcatcgttgatccgaaaatgcaaagtctttattgcccagccgaggtatcgtatc
tcaagtattgcgggaaggtcttcggtctttttgggttaa
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