Daphnia pulex (common water flea): DAPPUDRAFT_239388
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Entry
DAPPUDRAFT_239388 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_239388
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
DAPPUDRAFT_239388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FYVE
DUF4202
TPR_2
PT
Motif
Other DBs
NCBI-ProteinID:
EFX84091
JGI:
Dappu1_239388
UniProt:
E9G963
LinkDB
All DBs
Position
Unknown
AA seq
1876 aa
AA seq
DB search
MSDGILSIKSGNRVIETDGPILHSTAIYNERTTRGQDCRDSSERPLAATKSNAGQVDGQP
ASQPASQPASQPASQPSGVGRIRKKGGNTLMEAETTTAAWMIELCKTMKKEHTECLLRNG
FVGHVAHQSGKIFHEQEDGLLAPAKVTGTPSTSDELKHLLVVNKDGNKTVDGMFPLPAGV
YEILHALLPLFTFTREEPPADAKSLDCFVTDLSDLLKKSFNWLDEEDVFTKALKWLKEKV
CFAVWCLDQSFCGPGTSLKTILELCTQQPSNLNTLKSLGGLQLVNQQDVSAFLDYYSINV
YRGFLALSGFIQYLFKPFQRTQNKATNLEEVDSLIRDINCKEMSLQVMEDVFTLCFLRKE
DIIFEDTASDSGAEEIKSEEVSQKSKKSGEPSCPSNSNSPSNTQTGTSSPACLAGKKGDM
SLGFLCQDPDKLQKSLLMLKMRLEAIQVGDDAELSLRHRKLEQRVSQALWRLQLVDYEPR
TASYFSRPRPPQDGCIVVRKAWLARLNPSVQTWYGYNGGRRKLRPPSSAKASKAIDRHID
PLLVNRLLADPLSLMAMSMMNSQLSAARQVADLYQLWETPQGRELHFSLAHASAAQELRR
IGRQIAGSQDPKVESLSHVRLPSAVETQLSTLQQAVVPSLTADDDWQSAVLMADLINSST
LSTPELNVQLLNYALRRIEGTVDTNVEPWRTLRRFTDSSNYLLPAGSSPAQSHLPFDVER
LKERAERLESIGVAFRQLAEASQLGGGCNHPDPFDSALEMLDRILGGQSTPLLRMKRYSG
ILRQLIPSRLQGESSARLLEVHHVAVLIMERLREQPEAIEEMETIAQSMGIELPAFLAEC
LCSIPDSGAKLVDLSDREFVVKLITYLHARCPILAQVVELQLQTRHGFSHFPDLDRQVGT
ECLALFRRYLERPSQLGRSLKESTTCPPVNSKPPKRAHVRPLPDSPSPIVDAHNSLLAES
EEEPTARLGALILEAIPQASAKQLEHLLPQPLLIVEQLLMNSQMGLATDLVKVLRLNGPD
EDMEEIDKLLLRYATKALALGLPEIASSPPSRDSSSKVQQVDQMSKKKKTGAFELPATVP
PKEQWVKDADVDQCPCCKTVQFSMFDRRHHCRRCGRVVCSACSPHRRLVDGYGDVPVRTC
VDCHSTLQDRSESEPRSVRSTAGDGGQLVWRLSLDAQHNQIARREFSYEHAPNLALALAM
VHLCHCNETMANFLLDQSSSMLATLHRYLLHGTLMDVCSDPLMMFSLIKSLILGAKMRYS
DIIAAPSQSKGKPSRGLARCDALLGQIDLLSLLVSANCLHLLPPQPMSQLDTWRKLRDRL
IDIELWSLALDVSTKAGLDAGSVWAAWGLVCLKAGNFQGARQRFQRCFKPGKNSPLLQEI
LSVLESLSIPCASLPGNMNESSAGSSWNSKRTRNLSSPSSLPSPVFNCDNPQLIVASLTR
LGDICAGNLVEVEDKNCIMEEILFYLESYGQPESPCAYLVERSGRIDLAVHRFASSSNGR
HKTSDVFNQGLLLPCLKSSKLEDLIIEMKRHDSSFYSWKTHLLAAAQLLETKCFWNSLYQ
LHCLCGDWIRASLVAIRRLFLSDLFSVETLISRSHLLEDITAHLNQYLGRQQSLDPQGES
EKQLPLWWPVNEVISLQKTVQLQMKVTSFLDACLKEGKLSIAFLAVVKSVTQSPDGISGS
FGELNSNNNSGVYLIPTLLGSRQFRCSSAVLITCANPDAFSFELSWTICCDLRVRLDRYF
RLSSFVLIRRGQVPALIQLVEFIKGRMTSQSVGFFDMDDLLVECATLVQERDRESRSPDL
ELIVQYIKKPASKIRGFINLGWLKAAYLLAVKNGQVADVIHIQQEATRLQQMAVLALCDK
WLRAPLLDTYASKSAL
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgggattctttcaatcaagtcgggcaaccgagtcatcgaaacggacggtcca
atattacactcgacggccatatacaacgaacgtactacccggggccaggactgtcgtgac
agttcagagcgcccgctggcggcgacgaaatcgaatgccggacaagtggacggccagcca
gccagccagccagccagccagccagccagccagccagccagccagccatccggcgtcggc
agaattagaaagaaggggggaaacacgttaatggaagctgaaacaacaacggccgcctgg
atgattgaattatgtaaaacgatgaaaaaagaacacacggagtgtttgcttcgcaacgga
tttgttggccatgtggctcaccaatcgggaaagatattccacgaacaagaagatggtctg
ctggcgccagccaaagtgactggcacaccgtcgacgtcagacgaactcaaacatctgctt
gtcgtgaacaaggatggaaacaaaacagttgatgggatgtttcctttaccggctggggtg
tacgaaatcctccacgctctgctacctctgttcacgtttaccagagaggaaccaccagct
gatgcaaagtctctggactgttttgtcaccgatttgtcagacttgctgaaaaagtccttc
aattggctagatgaagaagacgtcttcactaaagccttgaaatggctcaaagaaaaagtc
tgctttgccgtctggtgcctcgatcaatccttctgtggccctgggacctccctgaaaaca
atcttggagctgtgcactcaacaaccatccaatttaaacacactgaaatctctgggtggc
ctgcaactggtcaatcaacaggatgtatctgcctttcttgactattattccatcaatgtt
tacaggggattcctggcccttagcggtttcattcagtacctcttcaaaccatttcaaagg
acgcagaacaaagccaccaacctggaagaggttgacagcctcatcagagacatcaattgc
aaagaaatgagtctccaagtcatggaggatgtattcactctttgcttcctgaggaaagaa
gacatcatctttgaggacactgcctcagacagtggggcagaagaaatcaagtccgaagaa
gtctcccaaaaatccaaaaagagtggagagccttcttgcccatcaaacagtaacagcccg
agcaatactcaaacggggacgtctagccccgcctgtttggcaggcaaaaagggcgacatg
tcgctcggttttctgtgccaggaccccgataaactccagaaatcgctcctgatgctcaaa
atgcggctggaagccattcaggttggcgacgacgcggaattatcgctgcggcatcgtaaa
cttgagcagcgcgtcagtcaagccctttggagactgcaacttgtcgattacgagccccgg
acggccagctatttctcccgtccacgaccgccgcaagatggctgcattgtcgtacgcaaa
gcctggctggcccgcctcaatccatcggtgcagacctggtacggctacaacggcggccgt
cgtaaattgcgtccgccgagctcggccaaggcgagcaaggcaatcgaccgacacattgat
ccgctgctggtcaaccggctgctagctgatccgctttcgttgatggccatgtccatgatg
aattcgcaattgtccgccgcccgtcaagtggctgatttgtaccaactctgggagactccg
cagggacgggaattgcatttcagtttggcccacgcttccgccgcccaggagctccgtcgc
atcgggcgccagatcgctggctcgcaagatcctaaagttgagtccctcagtcacgtccgt
ctaccgtcggccgtcgaaactcaactcagcacgctacagcaggccgtcgtgccttcgttg
actgccgatgacgactggcaatcggccgtcttgatggccgatctaatcaattcttccact
ttatccacaccagagctcaacgtccagctactcaattacgcactgcgacggatcgaaggc
acggtcgacaccaatgtcgagccgtggcgcaccctgagacgtttcaccgactccagcaat
tacctcctaccggccggatcgtctcctgcccagtctcatctgccattcgacgtggagcgg
cttaaagagcgggccgagcgtttggaatccatcggcgttgcatttcgtcagctcgccgaa
gcgtctcagttgggcggcggatgcaaccatccggatcccttcgattccgcattggaaatg
ttggaccgaattctcggcggccagtcgactcctctactccggatgaagcgttactccggc
attttacggcagttaattccgtcgcgattgcagggggaaagttccgcccgtctcctggaa
gtgcaccacgtcgccgtgttgattatggagcggttgcgggagcaaccggaagccattgag
gaaatggaaacgatcgcccagtcgatgggaatcgaactgccggctttcctggccgaatgc
ctttgctccattccggattcgggggccaaattggtcgacctgtcggaccgtgaattcgtg
gtcaaattaatcacttacctccacgcccgttgtccaatcctggcccaagttgttgagctc
caactgcagacccgacacggtttctcccattttccagatctggacagacaggtcggcacc
gaatgcttggctctgttccggcgctacctggaacggccgtcccaattgggtcggagcctt
aaggagtcaacgacgtgtccgcccgtaaactccaaaccgcccaaacgggctcacgtccgc
ccactgccggattcgccatcgcccattgtggatgcccataattcattgctggccgagtcg
gaagaggagccaaccgctcgattaggagccctgatcctggaagccattcctcaagcctcg
gccaaacagctggagcacttgctaccccagccgcttttgatcgtcgaacaacttttgatg
aacagtcaaatgggactggccaccgatttggtcaaagtgctgaggctcaacggccccgac
gaggatatggaagagattgacaagctcctcctacgttacgcaaccaaagccctggctctc
ggtctgccggaaattgcatcttctcctccttccagggattcttcttccaaagtccagcag
gtcgatcagatgagcaagaagaagaaaacgggcgctttcgagctgccggccaccgtcccg
cccaaggagcaatgggtgaaagatgccgatgtcgaccagtgtccctgctgcaagacggtc
cagttctccatgttcgatcggcgccatcactgtcgccgttgcggccgtgtcgtctgctcc
gcctgttctcctcacaggagactagtcgacggttacggcgacgttccagtccgcacctgc
gtcgactgccactccaccctgcaggatcgctcggaatcggagcctcgatccgttcgttcg
acagccggagacggcggccagctcgtctggcgattgtcgctagacgcccagcacaatcaa
attgcccggcgtgaattcagttacgaacacgctcccaatttggccctggccttggccatg
gtacatttgtgccactgcaatgaaacgatggctaatttccttctggatcagagcagctcc
atgctggccactttacaccgctacctccttcacggcactttgatggacgtttgctccgat
cctttgatgatgttctctctcatcaaatcgctaattttaggcgccaaaatgaggtactct
gatatcatcgccgccccgagtcaaagcaaaggcaaaccgtctcgcggcctggcccgctgc
gacgctttgctcggacaaattgatttattatcgctgcttgtctcggccaattgccttcat
ctgcttccgccgcagccaatgtctcaactggacacgtggaggaaactcagggaccggctc
atcgacattgaactctggagtttggcgctggatgtcagcaccaaagccggactggatgcc
gggtccgtttgggctgcctgggggttagtttgcctgaaagctggaaattttcaaggagct
cgacagagatttcaacgatgttttaagccgggcaagaattctccactgttgcaagagatc
ctttcagtgttggagagtctgagtattccctgtgccagtttgcccggcaacatgaacgaa
agcagcgccggaagttcgtggaactcgaaacggactcgaaacctatcgtctccctcgtct
ctgccttcgcccgttttcaactgcgacaatccgcagttgattgtcgcttcgctgactcgt
ctgggcgacatttgcgctggaaatttagtcgaagtggaggataaaaactgcatcatggag
gaaatcctcttctacttggagagttatggccagcccgaatcgccctgcgcttacctcgtc
gaaaggagcggaaggatcgatctggccgtccaccgtttcgcctccagtagcaacggccga
cacaagacgtcggacgtcttcaatcaaggactgttgttgccttgtctcaagtccagcaaa
ctcgaggatctgatcatcgaaatgaagcgtcacgactctagtttctactcgtggaagact
cacctgctggccgccgctcaactgctggagacgaaatgcttttggaacagtctctaccag
ctgcattgcctttgcggtgactggatccgggccagtttggttgccatccggcgacttttc
ctcagcgatcttttcagcgtcgagacgctgatcagccggtcgcatttactcgaagatatt
accgcccatctgaaccagtatcttggccgtcagcagtcgctggatcctcaaggcgaaagt
gaaaagcagttgccgctctggtggccagtcaacgaagtgatttcactccagaaaacggtc
caacttcaaatgaaagtcaccagcttcctggacgcgtgtttaaaggaagggaaattgtcc
atcgccttcctggccgtggttaagagcgtcactcagtcgccggacgggatcagcggttct
ttcggcgaattgaatagcaacaacaacagcggagtctatttgattcccacattactgggc
tctcgacagttccggtgttccagcgccgtcctgatcacttgcgccaaccccgacgcgttt
tcctttgagctttcgtggaccatttgctgcgatttgcgtgtcagactggatcgttacttc
cgtctgtcgtctttcgtcctgattcgtcgcggtcaagttccagctctgatccagttagtg
gaattcatcaaaggacgaatgactagtcagtcggtcggcttcttcgacatggacgacctt
ctagtcgagtgcgccacattagtccaggagcgtgacagagagagcaggagtcccgatctt
gagctgatcgttcaatacatcaagaaaccagccagtaaaatccgcggcttcatcaatctc
ggctggttgaaagctgcatatctgttggccgtgaaaaacggacaagtcgccgatgtgata
catatccagcaagaggcgacccgcttgcagcaaatggccgttttggcactttgtgataaa
tggctacgtgcccctctcttggatacgtacgcttcaaagagtgccttgtaa
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