Daphnia pulex (common water flea): DAPPUDRAFT_246577
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Entry
DAPPUDRAFT_246577 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K08129
nyctalopin
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dpx00535
]
DAPPUDRAFT_246577
Proteoglycans [BR:
dpx00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
DAPPUDRAFT_246577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_At5g56370
Motif
Other DBs
NCBI-ProteinID:
EFX78257
JGI:
Dappu1_246577
UniProt:
E9GQW9
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MNLTAAIALLALLFAAINSTAGFTFTSNNQRSDLNCSNVDYSPCTCDENSMVACDQIPIK
TLRSAFAKMAAHDLTGLKLTLSPAEKDLIPDDFLGQMNLAGDLIIYCRDSKRLRVSQKAF
QHSAATITRVFIDGCDLGQQPNLSFMSRFNHMMALVIKNSKNFKSFKGLPSQSPALSYLY
ITHSRGFEALAPDAVALPALRVLYLNFNQLNDASAAKLFKALAGSSTDSLTEIRLDENKL
TKIPDAIKSLAKLEQLELGFNEIAVISKNSLPVNNTGTNGLAFSLQKNPIATIEPGAFGG
NIGNSNYVKLQDIQLTQLDPKIFKPVLQRMLIRSKKVLGRTPFLYLGNNAIQCDCHLAWL
VRDNRNLLNYIEGAKCSDSRELIDLKADDYHVIAI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaactgctgccatcgctctcctcgccctgctgtttgccgccatcaattcgacg
gccggtttcaccttcaccagcaacaaccagcgctcggacctgaactgctccaacgtcgac
tactcgccgtgcacttgcgacgagaacagcatggtggcctgcgaccagattcccatcaaa
actctgcgctcggccttcgccaaaatggccgcccacgacctgaccggtctgaagctgacg
ctgtcgccggccgagaaggatctcatcccggacgatttcctcggccagatgaacctggcc
ggcgacctcatcatctactgccgcgacagcaagcgactccgcgtcagccaaaaggccttc
cagcactcggccgccaccatcacccgggtctttatcgacggctgcgatctgggccagcag
cccaacttgtccttcatgtcccgtttcaaccacatgatggcgctggtcatcaagaattcc
aagaactttaaaagcttcaaaggtctgcccagccagtcgccggccctctcctacctgtac
atcacccactcgcgagggttcgaagcgctggccccggacgccgtagccctgccggccttg
agagtcctctacttgaatttcaaccagctcaacgacgcctcggccgccaaactcttcaaa
gccctggccggctcctcgaccgactcgctgacggagatccggctggacgagaacaagttg
acgaaaatccccgacgccatcaagtcgctggccaaactcgagcagctggaattgggcttc
aacgagatcgcagttatttccaagaactcgctgcccgtcaacaacacgggcaccaacggg
ctggccttcagcttgcagaagaaccccatagccacgatcgagccgggcgcctttggcggc
aacatcggcaacagtaattacgtcaaattgcaggacattcaattgactcagctggacccg
aaaatcttcaagcccgtcctccagcggatgctgatccgctccaaaaaagtcctgggcagg
actccgttcctctacctgggcaacaatgccattcagtgcgattgccacctggcctggctg
gtccgcgacaaccgcaatttgctcaactacatcgaaggcgccaaatgctccgactcgaga
gaattgatcgacctgaaagccgacgattaccacgtgatagctatatag
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