Daphnia pulex (common water flea): DAPPUDRAFT_249247
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Entry
DAPPUDRAFT_249247 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DAPPUDRAFT_249247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpx03009
]
DAPPUDRAFT_249247
Ribosome biogenesis [BR:
dpx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DAPPUDRAFT_249247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
HipA_2
Dyp_perox_N
DUF4919
Motif
Other DBs
NCBI-ProteinID:
EFX76313
JGI:
Dappu1_249247
UniProt:
E9GW86
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
MALKRRKVNESGGPQTKKKPTFKKAKKVVEKVIDDSPEEDFEDEDDNGFGDSEDGFDDME
EIPLDITEAVSIVKKPAKPTSKPQTKAPAKVKTEKVNQKDVSKAHKKDLQKPPTSQEMNA
LRETENLFHSNIFKLQVEEMLAEISMKNKRKKEIEDWMNQLQDTIDNIPESGTHSISDTT
WLDELNVTCPFESDCYDSTKTFQYLKPQKLIPIGSWAIGMTGKGTSVDILIEIPRESLER
DDYLNYTYHRKRALYMAYLAAHLQKATALVQDAQFESLSGDLSRPILLVQPTGKLNQRVA
FRIYASASADLVAVEKLLPRRNCVTSSSSKNFYNKPSPLYNMSVLADMRMAKINQHASEV
LSSKKNILDSCLLLRIWLRHRQLDESIGMFVLTQFVVYLVDTKKLFPNMSIYQIIRTVWL
QLSRSDWSKEGITLRQQSDTAPLPVADAHASFPIVFLDETSTLNFCAHLSQAAYEWLRWE
STLAVGLLNKKGVNSFAALFITPKPFLLTFDNVVMIDDAQARLQKDKRQLYWLTGAAEKI
HQCLAKGLGDRLKLAACRRLPVGSWSVATKPPKDSSRKLAFGFCFNSPAAWEVVNKGPAA
DSPESVEFRSFWGEMSQLRRFQDGFICEAVHWPASNWAERRLICRRIVSFLLEKRLNLSN
SFVYIADQLETALFIPRLEKSVAYGTGEEFTMKALEALDELTKNLRSLEDLPLSIAQVQG
VAATFRHAETFPPQPGIPQGRLSLFDKIGDNMLPSVEATPIYLPSLSVLLTLQTSGKWPD
DIEAVRRIKAAFYIQLAEKLRVLFDLVVRVFTDHIIVERRGYIFKLVIAYHRDVALLKRF
VEPNGIVKYRDNPESLLLQRDQEITPRLAAALRALHAEQPAYSTAVRLAKRWIASHMLLE
YLEEEAVEMIVASLFVDSTMYGLPSEEESGAKSSLHDAIDWVGPLTPQVAFFRFLQLVST
YDWTSQPLVINFNNDLTPEVIRDIETSVAAQRAQLKSPLVLVTPYDPSGVAFTRSTPPLP
VWSRLMVLAQESLKLLERQLMESDVKTVDVFQAFRPPLDAYNCVIHLCKGAVARRLYTLD
SVLDKKVKLHEHQPRKTLSIYDYEPVDRLLDELRLAYADKARFFYDKYGGLLIGVMWIDK
AWSTPTEFKVSHVNGSMLVAPSAAGGEKRLAPNLEAICQDFLIMGKGLVESVECGALVWQ
DSTSRELVERVAKDVLTVGRIMRRHFDRVEKAQGWGRIDGGIATLVPSFNLLSDTLYWDA
ANRKNGPLPWLSQVDDDDDGPFLTHAKHIRSQHSLLDQKKKKNNKKIMLIGSGSASVVSS
RSQPAPVGRPFEYPMSLRI
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggcactaaagagacgcaaagttaacgaatctggaggtcctcaaaccaaaaagaagccg
acatttaagaaagcaaaaaaagtcgtagagaaagtgatagacgattctccagaagaagat
tttgaagatgaagatgacaatggttttggtgatagtgaagatggttttgatgacatggag
gaaattcctttagatattaccgaggctgtttcaatcgttaaaaagccagctaagccaaca
tctaaaccacagactaaagctcctgctaaagttaaaacagaaaaagttaaccagaaggat
gtttccaaagctcacaaaaaagatttgcagaagcctccaacttcccaagaaatgaatgct
ctgcgggaaactgaaaatcttttccactccaacatcttcaaacttcaggttgaggaaatg
ttagcagaaatttcaatgaaaaataaacgcaagaaagaaattgaagattggatgaatcaa
cttcaagacaccattgacaacatacctgaaagtggtacacattcaatctctgacacaact
tggctcgacgaactaaatgtcacgtgcccttttgaatctgattgttatgactcgactaag
acattccagtatttgaaaccacaaaagctcatccctattggctcttgggctattggcatg
actggtaaaggcacatcagttgatatcctgattgagattcctcgagagtcgttagaacgg
gacgattatctgaattacacctaccatcgaaaaagagccttgtatatggcgtacttggct
gcccatttacagaaagcgacagcattggttcaagatgctcagttcgagtctctttccgga
gatctttcaagacccattcttctcgttcaacctacaggaaaactgaaccagcgggtagcc
ttccgcatttacgcttctgcttctgcggatttggtagcagtagaaaaacttcttcccaga
cggaattgtgttacaagctctagttcaaaaaatttttacaacaagccaagtcctctgtac
aacatgagcgtgttagccgacatgcggatggccaagatcaatcagcacgcatcggaagta
ctctcatcaaagaagaatattctggactcatgcctactcttacgaatctggcttcgacac
cgacaacttgatgagtctatcggcatgttcgtcttgacccaatttgttgtctacttggtt
gacacaaagaagctcttcccgaacatgagcatatatcaaattattcggactgtttggctt
cagttatctcgttcagattggtctaaagaaggaattactctacgtcaacagtctgatacg
gctccgttgccggtcgccgatgcccacgcttcgttcccgattgtttttctggatgagaca
agtacgttgaacttctgcgcccacctctcccaggcagcctacgaatggctaagatgggaa
tccaccctggctgttgggttgctcaacaagaagggagtcaacagtttcgccgccctgttc
atcactccgaagccgtttttgttgactttcgataacgttgtcatgattgacgatgcgcaa
gccagattgcaaaaagacaaacgtcaactctattggctgactggagcagctgagaaaatt
catcagtgtctcgccaaaggattgggcgaccgtctgaaattggcggcatgcaggaggctg
ccagttgggtcatggtccgttgcaaccaaaccaccgaaagactcttcacggaagttggca
ttcggattctgtttcaattctcccgctgcatgggaagtggtgaacaaaggaccggccgcc
gacagcccagagtctgtcgaatttcgctctttctggggcgaaatgtctcaacttagacgg
tttcaagatggcttcatctgcgaagcagtacattggccagccagtaattgggctgaacgt
cgtctcatctgccgtcgaatcgtctcatttctgttggagaaacggctcaacttgtccaat
agcttcgtttacatcgccgatcaattggagactgccctgtttattcccaggttggagaaa
tcggtcgcttacggaacgggagaagagttcactatgaaggcccttgaagccctggatgaa
cttacgaagaatctgcgatcactggaggacttgcctctctcgatagctcaagtgcaagga
gtggcagcaacattcaggcacgccgaaacctttccaccccaaccagggattccgcaaggt
cgattatctcttttcgacaaaattggagataacatgctcccttctgtcgaagcaactcct
atttaccttccctcgctatcggtcctgttgactttgcaaacgagcggcaagtggcccgat
gatatcgaagccgttcgccggatcaaagcggcattctacatccagctggccgaaaaactt
cgcgttctcttcgacctcgtcgttcgagttttcaccgatcacatcattgtggagcgcaga
ggctacattttcaagttggtgatcgcttatcatcgagatgtagccttgttgaaacgcttc
gtcgagcctaacggaattgtcaagtaccgcgacaatccggaatcactcctcctgcagagg
gatcaagagattaccccgagactggcagcagcactacgtgccctacatgcggagcagcca
gcctacagcacggccgttcgtttggctaagcgctggatcgcttcgcacatgctgttggaa
tatctcgaagaagaagccgttgaaatgattgtggccagcctgtttgttgattcgaccatg
tacggtttaccgtcggaagaagaatccggcgcgaaatcctcgctgcatgacgccatcgac
tgggtgggacctctgacacctcaagtggctttcttccggttcctccagttagtttcgacc
tacgactggactagccagccgctcgtcatcaatttcaacaatgacctcacaccagaagtg
attcgcgacattgaaacatctgtcgcagcccagcgagcccagctgaaatcacctttagtc
ctggtgacaccttacgatccatccggcgtggcgttcacgcgtagcacgccaccgctgccc
gtctggtcacgtctgatggtgttagcccaagagtcgctcaaattgctggagcgtcagttg
atggaatccgacgtgaaaaccgtggacgtgttccaggcattccgtccacccttggatgcc
tacaactgcgtgatccatctgtgtaaaggcgctgtcgcccgccgtctgtacacgctcgac
agtgtgctcgacaagaaggtgaagcttcacgagcaccagccgaggaagacgctctccatc
tacgattacgagcccgtcgatcgactgctggatgagttacgattggcctatgccgacaag
gcccgctttttctacgacaagtatggaggcttgctgatcggcgtcatgtggatcgacaaa
gcctggagcacgccaactgaatttaaagtctcccacgtgaacggctccatgttggtggcg
ccttcggccgcaggtggtgaaaagcggttagcccccaatttggaagccatctgccaggat
tttctcattatgggcaaaggtctggtcgagtcggtcgaatgcggagcacttgtttggcaa
gattcaacgtcacgggagctggtcgagcgtgtagccaaggacgttctcacggttggtcgg
ataatgaggcgtcatttcgaccgagttgagaaagcgcaggggtggggtaggatcgatggg
gggatcgccacgctagtaccgtctttcaatttgctaagtgatacgttgtactgggatgca
gcaaaccggaaaaacggccctttaccttggctcagccaagtagatgatgatgatgatgga
ccttttttaacgcatgctaagcacatacggtcccaacactcactcctcgaccagaagaag
aaaaaaaacaataaaaaaataatgttaattggcagtggcagcgcatctgttgtgtcatcg
cgttcgcagccggccccggtcggccgcccattcgaatatccaatgagtctcagaatttga
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integrated database retrieval system
