KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_253003
Entry
DAPPUDRAFT_253003 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K14290  exportin-1
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03008  Ribosome biogenesis in eukaryotes
dpx03013  Nucleocytoplasmic transport
dpx03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    DAPPUDRAFT_253003
   03008 Ribosome biogenesis in eukaryotes
    DAPPUDRAFT_253003
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    DAPPUDRAFT_253003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpx03019]
    DAPPUDRAFT_253003
   03009 Ribosome biogenesis [BR:dpx03009]
    DAPPUDRAFT_253003
   03016 Transfer RNA biogenesis [BR:dpx03016]
    DAPPUDRAFT_253003
   03036 Chromosome and associated proteins [BR:dpx03036]
    DAPPUDRAFT_253003
Messenger RNA biogenesis [BR:dpx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     DAPPUDRAFT_253003
Ribosome biogenesis [BR:dpx03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    DAPPUDRAFT_253003
  Pre-60S particles
    DAPPUDRAFT_253003
Transfer RNA biogenesis [BR:dpx03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    DAPPUDRAFT_253003
Chromosome and associated proteins [BR:dpx03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     DAPPUDRAFT_253003
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd Cac1_C
Other DBs
NCBI-ProteinID: EFX73613
JGI: Dappu1_253003
UniProt: E9H3Z7
LinkDB
Position
Unknown
AA seq 989 aa
MSFWRKSVVQHKCSDRLASDATVLSALRMNVTHYLVMATLAEQASKLLDFDQKLDITLLD
SIVGCMYSGACEQQRLARDVLTTLKEHPQAWTRVDTILEFSSNQETKYYALQILEAVIKT
RWKTLPRENCEGIRKYIVGLIITISSENESADREKVYLSKLNMVLVLILERELPKHWPSF
IPDIVGASITNESLCQNNMAILKLLSEEVFDFSSGNMTQIKAKHLKDSMCSEFSQIFQLC
QFVMDNSANAALVGSTLETLLRFLSWVPLGYIFETKLIATLNLKCLNVPLFRDVTLKCLT
EIAGIAPGPQYDDALTALFAQTMTQLKLMLPLDIKIKEAFAKGHDAEQNFIQNSAMFLCT
TLRQHGPLMERRNKGNVLKALQYLLLISEVDETEIFKICLEYWNALAADLYRDMSNDQNE
QHSIICTRLRYIIISRMAKPEEVLVVENENGEVVREFMKDTDSINLYKNMRETLVYLTHL
DYVDAERIMTDKLQNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLITVIKELLVH
SFYEAVGYMISAQTEKFVQEPLIERYMLLPNQVWDDIINQATRNVDVLKDPDAVKQLANI
LKTNVRACKALGHPYVSQLGRIYLGMLNVYKVMSENISGAIALSGENVTKQPLIKSMRLV
KKETLKLISDWVSRSNDPELVLDNFIPPLLNAVLYDYQRCAVPSAREPEVLSTMATIVNK
LEGHITSNVPKIFDSVFQCTLDMINKNLEEFPEHRTNFYLLLQSVNNHCFPAFLSLPPAQ
FKLVLDSIIWAFKHTMRNVADTGLDILYQLLQNVSQHEQAAQSFYQTYYTEILQHVFSVV
TDTSHTAALTMHATILAYMFTIVEMGKVAVMLDPSGAWISPESPTAANVIFVKNSVVEVL
HNAFPHLTQLQIKVTVEGLFNLDQDITGFREHLRDFLVQIKEFTGDDDSDLYLEEREGEL
RRAQDEKRKVQMSVPGILNPHDIAEEMQN
NT seq 2970 nt   +upstreamnt  +downstreamnt
atgtctttctggcggaaatcggtggttcagcataaatgctctgaccgtctggcgagtgac
gcaacagtgttgagtgcgcttcgcatgaacgtaacacactaccttgtaatggcaactcta
gcagagcaagcgtcaaagctgctggactttgatcagaagttggacattacattacttgat
agcatagttgggtgtatgtactctggagcttgcgaacaacaacgactagcacgtgacgtc
ttgacgacactgaaggagcaccctcaggcttggacgagagtagacacaatcctcgagttt
tcgagcaatcaagaaacaaagtattatgccctgcaaattctagaagccgtcataaaaact
agatggaaaaccttgcctcgagaaaattgcgaaggaataaggaaatacatcgtcggtttg
atcatcacaatttcttcagaaaacgagagtgctgatcgtgaaaaagtgtaccttagtaaa
ctcaacatggtactggttctaatactggaacgtgagttgcccaaacattggccctcgttc
atcccagatattgtcggtgccagcataaccaacgagagtttgtgccaaaataacatggcc
atccttaagcttctttcggaagaagtatttgacttttcatctggtaacatgacgcagatt
aaagctaagcatctgaaggattccatgtgctctgaattttcccagattttccagctctgc
cagtttgttatggacaattcagccaacgctgcccttgtgggttctaccctagaaacactt
ttacgatttctcagctgggtacctctgggctacatctttgaaaccaagctgattgcaact
ctcaacttaaaatgtctgaacgtgccactctttcgcgacgttactttgaagtgtctcaca
gaaattgccggcatagcccctggtccccaatacgacgatgcattgaccgctcttttcgcc
cagacgatgactcaactgaagttgatgctccctctcgacatcaaaatcaaagaagctttc
gccaaaggccatgacgcagaacagaattttatccagaactcggcaatgttcctctgcacc
acgctacgtcagcatggtccattgatggagcgtcgcaacaagggcaacgttctcaaagcc
cttcagtatctactactcatctccgaggtggacgagactgaaatcttcaaaatttgcctc
gagtactggaacgccttggccgccgacttgtatcgcgacatgtctaatgaccaaaacgag
caacacagcatcatctgcactcggttgcgttacatcatcatcagccgaatggcgaaacct
gaggaggtgttggtggttgagaacgaaaatggcgaggtggttcgagagtttatgaaggat
accgactccattaacctctacaagaacatgcgagagactctcgtctacctgacccatttg
gattacgtcgatgccgagaggatcatgacggataaactgcaaaaccaagtaaatggaacg
gagtggtcgtggaaaaacctcaatactctatgctgggcgattggcagcatatcaggagcc
atgcacgaagaagacgagaagcgattcttgatcacagtcatcaaggaactcctggttcac
tcgttttacgaagctgtcggctacatgattagtgctcaaactgagaaatttgttcaagaa
cctttaatcgagcgctacatgctcctacctaaccaagtgtgggatgacatcatcaatcag
gccacgcgcaacgtcgacgttctgaaagatcccgacgcagtcaagcagttggctaacatt
ttgaagacaaacgttcgggcttgcaaagcgctgggccatccgtacgtctcccagctcggt
aggatctatttaggtatgcttaatgtgtacaaggtgatgtcagaaaacattagcggtgcg
atcgccctcagtggagaaaacgttactaagcaacccttgatcaagagcatgcggctcgtc
aagaaggagaccctcaaactcatttccgactgggtctcgcgttccaacgatcctgaactc
gtgctcgacaacttcatcccaccactgttgaatgcagttctctacgactaccaacggtgc
gcagttccttcggcccgcgaacccgaggttctcagcacgatggccaccatcgtcaacaaa
ctggagggccacatcacctccaatgtgccgaaaatcttcgactcggtattccaatgcacc
ttggacatgatcaacaagaacttggaagaatttcccgagcatcgtaccaacttctacctt
ctgctccagtccgtcaacaaccactgtttccccgccttcctcagtctgcctccggcccag
tttaagctagtgctcgactcgatcatctgggcgtttaagcacacgatgcgtaacgttgcc
gacacgggtctcgacattctctaccagctcctgcagaatgtcagccaacacgaacaggcg
gcgcagagcttttatcagacttactacaccgagattctgcaacacgttttctctgtagtg
accgacacatcacacacggcggccctcaccatgcacgccaccatcctggcttacatgttc
acaattgtcgaaatgggaaaggtggcggtgatgttagacccgtctggcgcttggatttcc
ccagagagtccgacggctgccaatgtcatcttcgtcaagaattccgtagtggaggtgctg
cacaatgcctttcctcacttgacacagctccagattaaggtgactgtcgaaggactcttc
aaccttgatcaagacatcactggattccgggaacatctccgagatttcctcgttcagatc
aaagaatttactggtgatgacgacagcgacctgtatttggaagagagagagggtgagctg
cggcgtgcccaggacgagaaacgcaaagtccaaatgtcggtgccgggcatcttgaacccg
cacgacatcgccgaagaaatgcaaaattaa

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