Daphnia pulex (common water flea): DAPPUDRAFT_259237
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Entry
DAPPUDRAFT_259237 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03013
Nucleocytoplasmic transport
dpx03015
mRNA surveillance pathway
dpx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DAPPUDRAFT_259237
09122 Translation
03013 Nucleocytoplasmic transport
DAPPUDRAFT_259237
03015 mRNA surveillance pathway
DAPPUDRAFT_259237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_259237
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_259237
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
DAPPUDRAFT_259237
Spliceosome [BR:
dpx03041
]
Complex C
Other components
EJC/TREX
DAPPUDRAFT_259237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-ProteinID:
EFX69031
JGI:
Dappu1_259237
UniProt:
E9HGW7
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MADNRGRELCVGGKPISSLRVVDLKVELEKRSLPKSGSKKELLERLRLHLQLEEDREAAL
ADEEHVPNLSLCNETENDFIREYLAAQQARFQVQREAKKQYEEKKRESEASAEETTQDED
EASDVSPTKKSPRKAMRPKKKEESTSTPKAHKSALDFQTPESMPYSTPPQEKRDEDGARH
ESDTTGEEEESMTPQTRKHKLLKYVQQPASSKGPGKSDTGQFSIADHVDRYQGSGTSERR
DPPPSSLYGEAINLKVENKKEISPVKKEPSPVKKEIPSPVKVETPPPVKKDERVLRGHKA
HSVKAPPTDVSDDEDDDDEEEGVFPRLVDVWSEKEREEEAAASASAEKSLAHKSGKPKEN
FEHPSLKVKQEDPEPHKPVVTVTLVEKCSEEESKDVAPCATDPLADNPSKTETISVEDEA
KPVKSECAVEVPPAEVVVEKVEIEDKKVEKVEDVKEDEALDMTTDTKADEACQKADLVIV
EEKVETAKLEEPVANSSAIEVPENDTVAASVSVVEIVSPAEIEEPIVDLVTVEKTNVPSE
TPNRDISITESEPEKMDQCETTPTDQSEPEKTDLCENKPIMKSEPELKGQPETKEPELKG
QPETKEPELKDQPETKEPELEDQPETKEPKEEVTNKPTDSQEDSVDSPPVKAVTAMAVEN
ETPPLIKSDVCEQPVVKVDPVPEEQPTDDNEEDELQMDTTETIDESLKLTEAPEAEEVAD
NRDQGHDKSRSSSRSPSPRQSSPEVERNRNERSVSPHATKQKVEVAPQSETNKGDTVRKW
KIRKQLPNVEAESGETEAPRKRRWGTSQLLPTKKPALVISTDSLKSLVPDAKPLSAEEVR
LGSPNFQPSTKPTVNQAQESEDHQLPAAEKVEKMEVVRRVAVEIAAEAFAPAKPEVVLAA
AAPLLEATSPAQQPRSSVLNVSNLVRPFTINQLKELLARTGHLIDGKFWIDRVKSSCLIQ
YETEEEAEETRAALHGIHWPTSNPKTLLVDYSTVEELENRMSGKETTNPPVAKIEPTMRA
AAAAIQSIEGKRDKAEKVREWDLGKTGEQGSEKLEQAHKGAHPAGEDDGELKPKDETPAK
LLDDLFRKTKAAPFIYWLPLTASQIAEKEEMRRQRLAERETRIREVQQRRDEELQQRQRE
REKQRENERERQRARERDREKEREKDRQRSRKRSRSSSRSSSSTTSSSPNKRRNNSKTPP
RKR
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaatcggggaagagagttatgtgttggggggaaacctatttcatccctacgc
gtcgttgatttgaaagtggaactagaaaaaaggagcctcccgaaatcaggaagcaaaaag
gaattgctagagcggctcagattgcacctgcaattggaggaagaccgcgaggctgcctta
gctgatgaagagcatgttccaaacctttcgctatgcaatgaaactgaaaatgatttcatt
cgtgaatacttggctgcacagcaggccaggttccaagtacaaagagaagccaagaaacaa
tatgaagaaaagaagcgtgaatcagaagctagtgctgaagaaacaactcaagatgaggat
gaagcgtctgatgtatctccaaccaaaaaatctcccagaaaagccatgaggccaaagaaa
aaagaagagtctacatctacaccaaaagcgcacaaatccgcactggattttcaaacacca
gagtcaatgccttactccactccaccacaagaaaagcgagatgaagacggggccagacac
gagagtgataccaccggtgaggaggaagaatccatgactccccagacccgtaaacataag
ctactcaaatatgttcagcagcctgcctctagtaagggtcctggtaagtcggataccgga
caattttcaattgcagaccatgtggatagatatcaagggagtgggacatcagaaaggcgg
gatccaccgccttctagtctctatggtgaagccatcaatttaaaggtggaaaacaagaaa
gagatttcacctgtcaagaaagaaccctcaccggtaaaaaaagaaatcccttcaccggtt
aaggtagaaactcctccccccgtaaagaaagacgaacgagtattgcgaggacataaggcg
catagtgtgaaagctccacccactgatgtgtctgatgatgaggatgacgacgacgaagaa
gaaggagtctttcctcgtcttgtcgacgtctggtcagagaaagaaagagaggaagaagct
gcagcttcggcctcggctgaaaaatctttagcacacaaatcgggaaaacctaaagaaaat
tttgaacatccttcgttgaaggttaaacaggaagaccctgaaccccacaagcccgtcgtc
accgtaacccttgttgaaaagtgtagcgaagaagagtcgaaggatgtagcgccgtgcgct
accgatccgctagcagataatccaagcaagacagaaaccatttctgtcgaggatgaagca
aaaccggttaaaagcgaatgcgcggtagaagtaccaccagcagaagtagttgtagaaaaa
gttgaaatcgaagataaaaaggtagaaaaggtagaggatgtgaaggaggatgaagcgtta
gatatgaccacggataccaaggcagatgaagcttgtcaaaaagcggatctcgtaattgta
gaggaaaaagtagagactgcaaagttagaggaaccggttgcgaactcctcagcgattgag
gtgcctgaaaacgatactgtcgccgcttctgtatctgttgtggaaatcgtatcgcccgct
gaaatcgaagaaccgattgtagatctcgtaactgtagaaaagacaaatgtcccctctgaa
acccccaatagagatatttcaatcacggaatcggaacccgagaaaatggatcagtgtgaa
actacaccaaccgatcaatccgagccagagaaaacggatctgtgtgaaaataaaccaatc
atgaaatccgagcctgagttgaagggtcagcccgaaacgaaagagcctgagttgaagggt
cagcccgaaacgaaagagcctgaattgaaggatcagcccgaaacgaaagagcctgagttg
gaggatcagcccgaaacgaaagagcctaaagaagaagttactaataaacctaccgattcg
caagaagatagcgtcgattcacccccggttaaggctgtgactgcaatggctgtcgaaaac
gaaacgccaccgttgatcaaatcagatgtgtgtgagcaacctgttgtcaaagtagaccca
gttcctgaagaacaacccactgatgacaatgaagaagatgaacttcagatggacaccact
gaaacaattgatgaaagcttgaaacttacagaagcacctgaagcagaagaagttgctgac
aatcgtgaccaggggcatgacaaatctagatccagttccagatcacctagccccagacaa
agcagcccagaagttgagagaaacaggaatgaaaggagtgtatcaccccatgcaaccaaa
cagaaggttgaagtagcacctcagtctgaaacaaacaaaggagacacagtgagaaaatgg
aaaataaggaaacagctgcctaatgttgaggctgaatcaggagaaactgaagcaccaaga
aaacgaagatggggaacaagccagcttctgcctaccaagaagcctgccttagttatttcc
acagattcccttaagtctcttgtaccggatgctaaaccactctcagcggaagaagttcgt
ctcggcagtcctaattttcaaccctcaacaaaacccaccgttaatcaggcccaagaaagt
gaagaccatcagttaccagctgctgaaaaagttgaaaaaatggaggttgtgagacgagta
gcagttgaaattgcggccgaagccttcgcccctgctaaaccagaagttgttctagctgct
gctgccccattattagaagcaactagtccagcccaacaacctcgatcatccgttcttaat
gtttccaatttggtccgaccatttactattaatcagcttaaagagttgcttgctcgtact
ggacacctaatcgatggaaagttttggattgatagagtcaagtcctcttgtttgatccag
tacgaaactgaagaagaagctgaagaaactcgggctgccttacacggaattcattggcct
acatctaatcccaaaaccctcctggttgattactcaactgtagaagaattagagaaccgc
atgtctggtaaagaaacaaccaacccacctgtagccaaaattgaaccaacaatgcgagcg
gccgccgcagccatccagtccattgaagggaagcgagacaaggctgaaaaagtacgcgag
tgggatttgggaaaaactggtgaacaaggatccgagaaattagagcaagcccataaagga
gcacaccccgctggggaagacgatggagagctcaaaccaaaagacgaaacgcccgccaaa
ctgttggacgatttgttccgaaaaaccaaagctgctccattcatttattggttgcccctg
actgcaagtcaaattgcagagaaggaagagatgcgtcgtcagaggcttgctgaaagagag
actcgtatacgagaagttcagcaacgcagggacgaagagctgcaacagcgacaacgcgaa
agagagaaacagcgtgagaacgagcgcgaaaggcagcgtgctcgggaacgagatcgtgaa
aaggaacgcgaaaaagatcgccaacgctctcgcaaacgcagcagatcttcatctagaagc
tcgtcgagcactacctcatcaagtccgaacaagagacggaacaacagtaaaacgccccca
cgcaagagataa
DBGET
integrated database retrieval system
