Daphnia pulex (common water flea): DAPPUDRAFT_299933
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Entry
DAPPUDRAFT_299933 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DAPPUDRAFT_299933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_299933
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
DAPPUDRAFT_299933
U7-dependent histone pre-mRNA processing factors
DAPPUDRAFT_299933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Utp12
SAM_SMF
Motif
Other DBs
NCBI-ProteinID:
EFX90110
JGI:
Dappu1_299933
UniProt:
E9FR65
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MATDPQVVIDKSLRSVFVGNIPYDVTEEKLKDIFSEAGPVVSFKIVYDRETGKPKGYGFC
EYRDQETALCAMRNLNGYEIAGRTLRVDNACTEKSRLEMQSLMQEKTTESPYGDAVDPTQ
APEMISKAVSSLPPEQMFELMQQMKQCMQNNPNEARQMLLQNPQLAYALLQALVVIRVVD
PSTALSMLQKGPGQTDVGMGGQHFAKTSNFPMPSQDLDLRHADPRMVRGDHDLRVPPAAP
MAVGGIGLPPTMQQQPPARPAQTMPEMDSRRDPRSSGPTGPRDPRAGMSRPGAGVPPIPA
SQPNVPPPVLPSGGGGLNVPVAAAPTAGAIGRALGPGTSDQEKAALIMQVLQLSDEQIAL
LPPEQRQSIMVLKEQIARSNR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgatccccaagttgtaatcgacaaatctttgcgatccgtctttgtgggaaac
attccttatgatgtcacggaagagaaactcaaagatattttcagtgaagctgggccagta
gtttcattcaagattgtttatgatcgtgaaactggaaagcccaaaggatatggattctgt
gagtatcgtgatcaggagacagctctttgtgcaatgagaaaccttaatggctatgaaata
gctggaaggacattgagagttgataatgcttgcacagaaaaatcgcggcttgaaatgcaa
agtctaatgcaggaaaaaacaacagagagcccctatggtgatgctgttgacccaactcaa
gcacctgaaatgatttcaaaggctgtgtcatctcttccacctgagcagatgtttgagctg
atgcaacagatgaaacagtgcatgcaaaataaccccaatgaagcccgccagatgcttttg
cagaacccgcaacttgcctatgccctactccaagccttggtcgtcatacgcgtagttgac
cccagcaccgcactcagcatgctgcagaagggtccgggccagaccgacgtgggaatggga
ggacagcacttcgccaaaacatccaactttccaatgccaagtcaagatttggatttacgt
catgctgatcctcgaatggtacgaggcgaccacgatttgcgagtaccaccggccgctccc
atggctgtaggaggaataggactgccaccaacgatgcagcaacagccgcccgcaaggcct
gcacagactatgcctgagatggattcgaggcgtgacccgcgttccagtggtccaaccggt
ccacgcgacccacgagcagggatgagcaggcccggtgccggtgtacctcctatcccagca
tctcagccaaacgttcctccacctgttttacctagcgggggaggtggacttaatgtgcca
gttgctgctgctcctacagcaggggctattggacgtgcactggggccaggaacttcagat
caagaaaaggctgctctgattatgcaagtccttcaactgtctgatgagcaaatcgctcta
cttccaccagagcagcgccagagcattatggttcttaaggagcaaattgctagaagcaat
cgttaa
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