KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_299933
Entry
DAPPUDRAFT_299933 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K14407  cleavage stimulation factor subunit 2
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DAPPUDRAFT_299933
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpx03019]
    DAPPUDRAFT_299933
Messenger RNA biogenesis [BR:dpx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     DAPPUDRAFT_299933
    U7-dependent histone pre-mRNA processing factors
     DAPPUDRAFT_299933
SSDB
Motif
Pfam: CSTF2_hinge RRM_1 CSTF_C RRM_7 RRM_10 RRM_occluded Utp12 SAM_SMF
Other DBs
NCBI-ProteinID: EFX90110
JGI: Dappu1_299933
UniProt: E9FR65
LinkDB
Position
Unknown
AA seq 381 aa
MATDPQVVIDKSLRSVFVGNIPYDVTEEKLKDIFSEAGPVVSFKIVYDRETGKPKGYGFC
EYRDQETALCAMRNLNGYEIAGRTLRVDNACTEKSRLEMQSLMQEKTTESPYGDAVDPTQ
APEMISKAVSSLPPEQMFELMQQMKQCMQNNPNEARQMLLQNPQLAYALLQALVVIRVVD
PSTALSMLQKGPGQTDVGMGGQHFAKTSNFPMPSQDLDLRHADPRMVRGDHDLRVPPAAP
MAVGGIGLPPTMQQQPPARPAQTMPEMDSRRDPRSSGPTGPRDPRAGMSRPGAGVPPIPA
SQPNVPPPVLPSGGGGLNVPVAAAPTAGAIGRALGPGTSDQEKAALIMQVLQLSDEQIAL
LPPEQRQSIMVLKEQIARSNR
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggctaccgatccccaagttgtaatcgacaaatctttgcgatccgtctttgtgggaaac
attccttatgatgtcacggaagagaaactcaaagatattttcagtgaagctgggccagta
gtttcattcaagattgtttatgatcgtgaaactggaaagcccaaaggatatggattctgt
gagtatcgtgatcaggagacagctctttgtgcaatgagaaaccttaatggctatgaaata
gctggaaggacattgagagttgataatgcttgcacagaaaaatcgcggcttgaaatgcaa
agtctaatgcaggaaaaaacaacagagagcccctatggtgatgctgttgacccaactcaa
gcacctgaaatgatttcaaaggctgtgtcatctcttccacctgagcagatgtttgagctg
atgcaacagatgaaacagtgcatgcaaaataaccccaatgaagcccgccagatgcttttg
cagaacccgcaacttgcctatgccctactccaagccttggtcgtcatacgcgtagttgac
cccagcaccgcactcagcatgctgcagaagggtccgggccagaccgacgtgggaatggga
ggacagcacttcgccaaaacatccaactttccaatgccaagtcaagatttggatttacgt
catgctgatcctcgaatggtacgaggcgaccacgatttgcgagtaccaccggccgctccc
atggctgtaggaggaataggactgccaccaacgatgcagcaacagccgcccgcaaggcct
gcacagactatgcctgagatggattcgaggcgtgacccgcgttccagtggtccaaccggt
ccacgcgacccacgagcagggatgagcaggcccggtgccggtgtacctcctatcccagca
tctcagccaaacgttcctccacctgttttacctagcgggggaggtggacttaatgtgcca
gttgctgctgctcctacagcaggggctattggacgtgcactggggccaggaacttcagat
caagaaaaggctgctctgattatgcaagtccttcaactgtctgatgagcaaatcgctcta
cttccaccagagcagcgccagagcattatggttcttaaggagcaaattgctagaagcaat
cgttaa

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