KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_299967
Entry
DAPPUDRAFT_299967 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DAPPUDRAFT_299967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpx03041]
    DAPPUDRAFT_299967
Spliceosome [BR:dpx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    DAPPUDRAFT_299967
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C ANAPC4_WD40 NBCH_WD40 PRP4 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_IFT122_1st Ge1_WD40 eIF2A Beta-prop_Vps41 WD40_like Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_Nup120_160 Nbas_N Beta-prop_HPS5
Other DBs
NCBI-ProteinID: EFX90163
JGI: Dappu1_299967
UniProt: E9FRG9
LinkDB
Position
Unknown
AA seq 432 aa
MSSTTGFAITIDDGEIRKHLRQIGEPITLFGEGPADRRNRLKELLSVHGHDLIDRKKEDE
KEIVKVEKDQTETTWYHEGPESLKIARLWLAYYSLPRAKQRLSNVKLESEIPESTRTAKR
QEMVKRMRGMNIMCSQVGDGRPISYCQFSPSGNLLATASWSGLCKLWNVPDCTLSHSLRG
HKCSVGAIVFHPQATLSLEPSELNMASCSMDGAVKLWNLESEEPIADMEGHAPHRVSKVE
FHPSGRFLATCVFDNSWRLWDLEQGVEVLHQEGHSKPVYNIAFNVDGSVAITGGMDSFGR
VWDLRTGRCIMFMEGHLKGVLGIDISPNGYHIVTGSEDNTCKIWDLRKRSCIYTIPAHTN
LVSSVKFERSSGQYIVSSSYDCTAKIWASNTWQPLKTLSGHDGKVMAVDVSPDGSFIATA
SYDRTYKLWSPE
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgtcgtctacaaccggtttcgctatcacaattgacgatggggaaattcggaaacatctt
aggcaaataggtgaaccaataaccctttttggtgaaggacctgctgatcgccgaaataga
ttaaaagagttactctcggttcatggacatgatttgattgatagaaaaaaagaagatgaa
aaagaaattgtgaaggttgagaaagatcaaactgaaaccacttggtatcatgaaggtcct
gaatcactcaaaattgctcgtttgtggttagcatattattccctccccagagcaaaacaa
aggttatccaatgtgaagcttgaatctgaaataccagaatcaacaagaacagccaaaaga
caggaaatggtgaaacggatgagaggtatgaacatcatgtgcagccaagttggtgatgga
agaccaatatcatattgtcaattcagcccaagtggaaatttgttggccactgcctcctgg
agtggcctgtgtaaattgtggaatgtacctgactgcactttgtctcattcattaagaggc
cacaaatgtagtgttggagcaatagtcttccatccacaagccaccttgagcttagaacct
tcagaattaaatatggcttcatgttccatggacggcgcagtcaaattgtggaatttagaa
agtgaagagccgattgctgatatggaaggacatgctccgcatcgagtgtcaaaagttgaa
tttcatccttctggaagatttttagctacatgtgtttttgataattcctggaggctatgg
gatctagaacaaggtgtagaagttcttcatcaagaagggcattccaaacctgtctacaac
atagcattcaatgttgatggttcagtggctatcacaggtggcatggattcttttggtcga
gtctgggacctcagaactgggcgctgcatcatgtttatggaaggtcatttaaaaggtgtc
ttgggcattgatatatcacctaatggctaccacatagtaactggaagtgaagacaatacc
tgtaaaatatgggatttacgtaagagatcttgtatctatactattcctgcacacacaaat
ttagtgtcgagcgtgaaattcgaaagaagttccggacagtatattgtctcatcttcgtat
gactgtaccgcaaagatatgggcgagtaacacttggcaaccactgaaaacactttcggga
catgacggaaaagttatggcagttgatgtatcgcctgacggttcgttcatcgccacagcc
tcgtacgatcgcacttacaagctttggtcccctgaataa

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