Daphnia pulex (common water flea): DAPPUDRAFT_299967
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Entry
DAPPUDRAFT_299967 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DAPPUDRAFT_299967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_299967
Spliceosome [BR:
dpx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
DAPPUDRAFT_299967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
NBCH_WD40
PRP4
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_IFT122_1st
Ge1_WD40
eIF2A
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_Nup120_160
Nbas_N
Beta-prop_HPS5
Motif
Other DBs
NCBI-ProteinID:
EFX90163
JGI:
Dappu1_299967
UniProt:
E9FRG9
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MSSTTGFAITIDDGEIRKHLRQIGEPITLFGEGPADRRNRLKELLSVHGHDLIDRKKEDE
KEIVKVEKDQTETTWYHEGPESLKIARLWLAYYSLPRAKQRLSNVKLESEIPESTRTAKR
QEMVKRMRGMNIMCSQVGDGRPISYCQFSPSGNLLATASWSGLCKLWNVPDCTLSHSLRG
HKCSVGAIVFHPQATLSLEPSELNMASCSMDGAVKLWNLESEEPIADMEGHAPHRVSKVE
FHPSGRFLATCVFDNSWRLWDLEQGVEVLHQEGHSKPVYNIAFNVDGSVAITGGMDSFGR
VWDLRTGRCIMFMEGHLKGVLGIDISPNGYHIVTGSEDNTCKIWDLRKRSCIYTIPAHTN
LVSSVKFERSSGQYIVSSSYDCTAKIWASNTWQPLKTLSGHDGKVMAVDVSPDGSFIATA
SYDRTYKLWSPE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctacaaccggtttcgctatcacaattgacgatggggaaattcggaaacatctt
aggcaaataggtgaaccaataaccctttttggtgaaggacctgctgatcgccgaaataga
ttaaaagagttactctcggttcatggacatgatttgattgatagaaaaaaagaagatgaa
aaagaaattgtgaaggttgagaaagatcaaactgaaaccacttggtatcatgaaggtcct
gaatcactcaaaattgctcgtttgtggttagcatattattccctccccagagcaaaacaa
aggttatccaatgtgaagcttgaatctgaaataccagaatcaacaagaacagccaaaaga
caggaaatggtgaaacggatgagaggtatgaacatcatgtgcagccaagttggtgatgga
agaccaatatcatattgtcaattcagcccaagtggaaatttgttggccactgcctcctgg
agtggcctgtgtaaattgtggaatgtacctgactgcactttgtctcattcattaagaggc
cacaaatgtagtgttggagcaatagtcttccatccacaagccaccttgagcttagaacct
tcagaattaaatatggcttcatgttccatggacggcgcagtcaaattgtggaatttagaa
agtgaagagccgattgctgatatggaaggacatgctccgcatcgagtgtcaaaagttgaa
tttcatccttctggaagatttttagctacatgtgtttttgataattcctggaggctatgg
gatctagaacaaggtgtagaagttcttcatcaagaagggcattccaaacctgtctacaac
atagcattcaatgttgatggttcagtggctatcacaggtggcatggattcttttggtcga
gtctgggacctcagaactgggcgctgcatcatgtttatggaaggtcatttaaaaggtgtc
ttgggcattgatatatcacctaatggctaccacatagtaactggaagtgaagacaatacc
tgtaaaatatgggatttacgtaagagatcttgtatctatactattcctgcacacacaaat
ttagtgtcgagcgtgaaattcgaaagaagttccggacagtatattgtctcatcttcgtat
gactgtaccgcaaagatatgggcgagtaacacttggcaaccactgaaaacactttcggga
catgacggaaaagttatggcagttgatgtatcgcctgacggttcgttcatcgccacagcc
tcgtacgatcgcacttacaagctttggtcccctgaataa
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