Daphnia pulex (common water flea): DAPPUDRAFT_300353
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Entry
DAPPUDRAFT_300353 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpx04121
]
DAPPUDRAFT_300353
Enzymes [BR:
dpx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
DAPPUDRAFT_300353
Ubiquitin system [BR:
dpx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
DAPPUDRAFT_300353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
Beta-prop_THOC3
zf-C3HC4_2
zf-C3HC4
Beta-prop_TEP1_C
zf-RING_Vps41
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
WD40_Prp19
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_EML_2
zf-ANAPC11
WDR55
Beta-prop_WDR36-Utp21_1st
Rtf2
Beta-prop_WDR3_1st
DUF641
zf-Nse
Beta-prop_RIG_2nd
PGA2
DUF4200
Motif
Other DBs
NCBI-ProteinID:
EFX85650
JGI:
Dappu1_300353
UniProt:
E9G5D4
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MASDIDELAVRLDTADPEEVQVAGPSLEQRNQRASVIVVQPSSTENRIGTVELEITNEAQ
TDQDSRDSLAESNGPLSPILIRGRRRRPRDEDNDDEETEDGGPPSRKSKSDSAGGFLAEK
EDKSAVDDEEDGQVCPVCFDVWSNSGSHRVVSLKCGHLFGQACIERWVHSGGKGARCPQC
NESAQKKDIRPIYVRNLKAIDTTERDRALSALEQEKENRRRLELEYHKLQIQTTAKEQDI
LRLQQELQQCRAALSGACLAASGQGAELPLAGAVLDSTLELCKEGQCRVMSYSEHLTLLV
VSYAGTNSHLTGTGIKKPIRDMAFHLEQNDLLLTVSLDKTAKLVNVHSDISVTSYQCDAP
LWSCAWNADNKYQFFVGTGTGKVLLYDMRKSGDAVECWSEPNSMSPVTGLAYLPFSPVTT
FPRGGLFVQRLQSCVFHESRTDGFVPHTLPLDGSFTSLCIEPETRHFLASSRPSTAHPQA
RHTVCAPSWTPLGSDSSTGLCSSHAITTIQAGSQQKLLSRSCLLTAPGSTEGKQLMVAAH
QEAAQCISLWDVNSSAVLQKLPCSDPVLDLLPIRVNGVHFVAALSEKNARFYKWT
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgacattgacgaattagcagtaagattagatactgctgatccggaagaagtc
caagttgcaggtccctcacttgaacaacgtaaccaaagagcaagtgttattgttgtccag
ccttcgtctactgaaaacagaattggtaccgtagaactggaaatcacgaatgaagctcaa
acagatcaggatagtcgtgatagtttagctgaaagtaatgggccattgtcccctattttg
atcagaggcaggcgacgcagacctagagatgaagataatgatgatgaagaaactgaagat
ggtgggcctccttcaagaaaatccaaatcagattctgctggtggttttctcgcagaaaaa
gaagacaaatctgctgtagatgatgaagaagatggacaagtctgcccagtatgttttgat
gtttggagcaactctgggtcccacagagttgtgtcgttaaaatgtggacatttgtttgga
caagcatgcatagaacgttgggttcactctggtggcaagggggccaggtgtccacagtgt
aatgagtccgctcaaaagaaggatattaggcctatatatgttagaaatttaaaggcaata
gacacgacagaaagagacagagccttgtcagctctagagcaggagaaagaaaaccgtcgt
aggttagagttagagtatcacaaacttcaaattcaaacaacagccaaagagcaagatatt
ttacgattgcaacaagagttacagcaatgccgtgcagctttgtcaggcgcctgtttagca
gccagtggccagggagccgaattacctttagcgggggcagttctggattcgacactggag
ctttgtaaagaaggccagtgtcgcgtcatgtcttacagcgaacatttaactctgctcgta
gtgtcttatgctggaacaaattcgcacttgacgggcactggtatcaagaaacccatccgc
gacatggccttccacctggaacagaacgacctgcttctgactgtttcgttggacaagacg
gccaagctggtaaacgtccacagtgacatctcagtcacttcgtaccagtgcgatgcacct
ctttggagttgcgcatggaatgccgacaacaaataccaatttttcgttggaactggcact
ggcaaggttttactttacgatatgcgcaaatctggcgatgcagttgagtgctggtcagag
cccaacagcatgtcgcccgtcactggacttgcttaccttccattcagtccggtgaccact
tttcccagaggtggactatttgttcagcgtttgcagtcgtgtgtcttccacgagtcacgg
acagacggctttgttccacatacactgcctttggatgggtccttcacatcgctttgcatt
gagccagagacgcgccattttttggcttcgtctaggcccagcaccgctcatccccaagct
cgacataccgtctgtgctccttcttggactccattgggtagcgattcgtccaccggcctt
tgcagtagtcacgctattacgaccatccaagctggatcacagcagaagttgctctcccgt
tcgtgcctccttactgccccgggctccactgaaggcaagcagctaatggtggctgcccat
caagaggccgcccagtgtatttcgctatgggacgtcaattcatcggcagtgcttcaaaag
ctgccctgttcagatcccgttttggatctcctccctatccgcgtcaatggcgtccatttc
gttgctgcattgtcggaaaagaatgcccgtttctacaagtggacataa
DBGET
integrated database retrieval system