Daphnia pulex (common water flea): DAPPUDRAFT_300465
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Entry
DAPPUDRAFT_300465 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpx03009
]
DAPPUDRAFT_300465
Enzymes [BR:
dpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DAPPUDRAFT_300465
Ribosome biogenesis [BR:
dpx03009
]
Eukaryotic type
90S particles
Helicases
DAPPUDRAFT_300465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
AAA_19
ResIII
HA2_N
nSTAND3
Flavi_DEAD
AAA_30
ATPase
AAA_16
TsaE
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
EFX85421
JGI:
Dappu1_300465
UniProt:
E9G568
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MGPNKKGYNWKARQVVKTKIIRAEGVQIEINGAESSKYDECNALVLPSKKRTTKVVKEKK
SNQRILSKTQRKKLEKIVDVKKKKANRAELLESLAKFQPSAQELSMMTSLTSVQTKGIKR
SIAETNSVTLFDEPGENKQENGAAGGKRRQRWKEKEEKGDVENPQTDDNVIGLEVIDESS
DSEQEASEDEEKAEDEEAEEAVVSEEIVSKEDVSNADTKESDAAVNATQEHKETKSDDTP
VLKRESKPAIFVPVHRTAEVQAARMKLPILAEEQAIVEAINENPVVILAGETGSGKTTQV
PQFLYEAGYAANGKIIGVTEPRRVAATSMANRVAEEMNLHDGQVGYQIRFEGNVKDNTRI
KFMTDGVLLKAIQKDFLLNNYSVVIIDEAHERSVYSDILLGLLSRIVMLRQKRGNPLKMV
IMSATLRVEDFTDNQRLFKTKPVVIQVEARQFPVSVHFNKRTAFEDYVDESYRKVCKIHR
QLPDGGILVFLTGQQEVNALCRKLRQTFPGVKKTGESKPDEDMEKVLSKIKAKKQNMKKR
SKKEVDQRVKINLDHYSALPLQEQEQDHDESLGDLVDSDQELDINDESEALSQSQTAPPL
WVLPLYSLLPSYRQQKVFAAPPEGSRLCVVATNVAETSLTIPNVRYVVDTGRVKTKFFDK
VTGVSAFHVTWTSQAAANQRAGRAGRTGPGHCYRLYSSAVFNDEFEKFSLPDIARRPIDD
LVLQMKSMDIEKVIHFPFPTPPDIQQLYAAERRLLLLNALEPPPRNIRLKRKISQEWTSK
ITPLGRAMAAYPLAPRYAKMLLLSQQHDLLQLSITLVAALSVQELVLDQPADSEPGDTHR
RWLGQRRSWAGTGQSLFLGDPMVLVRAVGAAEYSGDIEAFCSTNGIRSKALREVRKLRVQ
LTNETNLIIPSGTTPIVVDPRMAPPTELQAKQLRQILMAGLPDHVARRIAPNEIKEAEDR
RKYKYAYRCPEMEDPVFLNPSSILRYSHPEWIVYQDIYEHDDKIYLRGITAIEPEWLPVF
SPSQCTFSAPLELPAPRYDSDQGRIVCHMNVTFGRSGWPLPVMELEFPAGIDRFKFFAQF
FLSGDVCHPLTKYTKFLLSTPSTMVKTWAKLQPRTQLLLKELTIQNVDSLDTLLAAWQKD
TLYLLAAYQAWVPESLHEEVAAHWPPV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggggccaaataaaaaaggttacaactggaaagcacgtcaagttgtcaaaacaaaaatt
attagagctgaaggggttcagattgaaataaatggggcagagtcttcaaagtatgatgag
tgcaatgcacttgttttgccatcaaagaaaaggacaacaaaagttgttaaagagaagaaa
tccaaccagcggatcttgtcaaagacacaacgaaaaaagcttgagaagattgtagatgtc
aagaaaaagaaagctaatagagcagagcttttggagtctctagccaagtttcaacccagt
gcccaggaactgtctatgatgacatccctgacttcagttcaaactaaaggcataaaacga
tccattgcagaaactaattctgttacattgtttgatgaacctggagaaaacaagcaagaa
aatggagctgccggaggcaagaggagacagagatggaaagaaaaggaagaaaagggtgat
gttgaaaatccacaaactgatgacaatgtaattggtctagaagtaattgatgaatcaagc
gattcggaacaagaggcatctgaagatgaagaaaaagctgaagatgaagaagctgaagaa
gctgttgtttctgaagagattgtttcaaaagaagatgtttcaaatgccgataccaaagaa
agtgacgccgctgtcaatgcaacacaagaacataaggaaactaaaagtgatgacactcca
gtgcttaaacgtgaatcaaagccggcaattttcgtgcctgttcaccgtacagcggaagtt
caagcagctaggatgaaactgcctatacttgctgaagagcaagcaattgttgaagccatc
aatgaaaatccagttgtcattttggcaggagagactggaagtggcaaaactactcaggtt
cctcaatttctctatgaagctggatatgcagctaatgggaaaatcattggtgtcacagaa
cccaggagggtggctgcaacttccatggcaaatcgtgtggccgaggagatgaatttgcat
gatggtcaagttggttatcagattcgatttgaaggcaacgtcaaggacaatacccgcatt
aaattcatgactgacggtgttttgttaaaggcaattcaaaaagatttccttctcaacaac
tattctgtagtgattatcgatgaagctcacgaacgcagtgtttactctgatattttactg
ggcctgttgtcgcgtatcgtgatgctgcgacagaaacgaggaaatcctttgaaaatggtc
attatgtctgccacccttcgtgtcgaagactttacagataaccaacgccttttcaagact
aagccggtcgttatacaggttgaagccagacaatttcccgtgtcagtacatttcaataaa
cggacggcctttgaagattatgtggacgaatcctatcgcaaagtgtgcaaaatccataga
cagttgcctgacggaggcattttagtttttctaactggtcaacaagaggttaatgccctt
tgtagaaaactacgtcagacatttccgggtgtcaagaaaactggggagtccaagcctgac
gaagacatggaaaaggttttgtctaaaatcaaagccaaaaagcaaaacatgaagaagcgc
tcaaagaaggaagtggatcagcgagtaaagatcaacttagatcattattctgctttgcca
cttcaggagcaagaacaagatcacgatgaaagtctcggcgatttggtggattctgatcaa
gaactcgatatcaacgatgagtcggaggctttatctcagagtcaaactgcacctcctttg
tgggtccttcctttgtattcccttctaccctcctatcgccagcagaaagtgtttgctgct
ccgcccgaagggtcgagattgtgtgtggtggccactaatgtcgcagaaacttcacttacg
atacctaacgtccgttacgtagtcgatactggtcgagttaaaacaaaattcttcgataaa
gtcacgggagtgtcagcatttcacgttacctggacctcgcaggctgccgctaaccagcgt
gctggtcgcgctggtcgtactggcccaggacattgttatcgtctctattcttctgccgtt
ttcaatgatgagtttgaaaagttctccttgccagatattgcaagaaggccgatcgatgat
ttagtcttgcaaatgaaatcgatggatattgaaaaagttattcactttccgttccctacg
cctccagatatccagcaattatacgcagctgagcgccgtttactgttgcttaatgctctg
gaaccgccaccacgcaacatccgactgaaacgtaaaatttctcaagagtggacatcaaag
attactccactgggaagagccatggccgcctatccactagcaccacgttatgccaaaatg
cttttgctcagccaacaacatgacctgcttcaattgagcatcactttggtggctgcctta
tccgttcaagaactcgtactggaccagccagctgattctgagccaggcgatacgcacaga
agatggcttggtcaacgccgatcctgggctggaactggacagtcactctttttgggtgat
ccaatggtacttgtccgagctgttggcgctgccgagtattcgggtgacatcgaggctttc
tgttccacaaatgggatacgcagcaaagccctacgtgaagtgcgcaagttacgagtccag
ttgaccaacgagaccaatttaattatcccgtctggtacaactcccatcgtagttgaccct
cgtatggcaccaccaacagagcttcaagcgaaacaattgcgacagattctaatggcagga
cttccagatcacgtggccaggagaatagctccaaacgaaattaaagaagccgaagaccgt
aggaaatacaaatacgcttatcgctgcccggagatggaggatcccgttttccttaaccct
tcgagtatcttgcgctattcacaccctgaatggatcgtctatcaagatatttatgaacac
gatgataaaatttatctgcgtggtattacggcaatcgaaccagagtggcttcctgtcttt
agtccttcacagtgtaccttctccgccccattggagcttcctgctcctcgttatgattct
gatcagggaagaatagtgtgccacatgaatgttacattcggaagaagtggttggcctcta
ccggtcatggaactcgaattcccagctggtattgaccggttcaagtttttcgcccagttt
ttccttagtggagatgtctgccaccctttaacaaaatataccaaatttctactatcaact
ccgtcaacaatggtcaagacttgggcgaagctccagcccagaacacagttgttacttaaa
gaattgacaattcaaaacgtcgatagtttggacacgcttcttgccgcttggcaaaaagat
acactctaccttttggcggcctatcaggcgtgggttcctgaatctctgcatgaagaagtt
gcagcccactggccacccgtgtaa
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integrated database retrieval system
