Daphnia pulex (common water flea): DAPPUDRAFT_301074
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Entry
DAPPUDRAFT_301074 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAPPUDRAFT_301074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_301074
03110 Chaperones and folding catalysts [BR:
dpx03110
]
DAPPUDRAFT_301074
03029 Mitochondrial biogenesis [BR:
dpx03029
]
DAPPUDRAFT_301074
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpx04147
]
DAPPUDRAFT_301074
Enzymes [BR:
dpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DAPPUDRAFT_301074
Messenger RNA biogenesis [BR:
dpx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DAPPUDRAFT_301074
Chaperones and folding catalysts [BR:
dpx03110
]
Heat shock proteins
HSP60 / Chaperonin
DAPPUDRAFT_301074
Mitochondrial biogenesis [BR:
dpx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DAPPUDRAFT_301074
Exosome [BR:
dpx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DAPPUDRAFT_301074
Exosomal proteins of other body fluids (saliva and urine)
DAPPUDRAFT_301074
Exosomal proteins of breast cancer cells
DAPPUDRAFT_301074
Exosomal proteins of colorectal cancer cells
DAPPUDRAFT_301074
Exosomal proteins of bladder cancer cells
DAPPUDRAFT_301074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF6956
Motif
Other DBs
NCBI-ProteinID:
EFX84424
JGI:
Dappu1_301074
UniProt:
E9G788
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MYRLPSLLRTAALRQIAPQAYRNYAKDVRFGADVRALMLQGVDVLADAVAVTMGPKGRNV
ILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNESAGDGTTAATVLARS
IAKEGFEKITKGANPVEVRRGVMLAVDSVIANLKAMSKQVTTPEEIAQVATISANGDESV
GKLISQAMNKVGREGVITVKDGKTLIDELEVIEGMKFDRGYISPYFINTAKGAKVEYQDA
LVLLSEKKISSIQSIIPALELANQHRKPLVIIAEDIDGEALSTLVVNRLKIGLQVVAVKA
PGFGDNRKNTLHDMANATGGLVFGDEANLVKLEDIQLHDFGQVGEVVVTKDDTLLLRGKG
RKEDIAQRVTQIKDQIAETTSEYEKEKLQERLAKLASGVAVLKIGGSSEVEVNEKKDRVN
DALCATRAAVEEGIVPGGGTALLRCIPSLDKLSYANEDQKVGIDIIRRALRMPCMTIAKN
AGVDASVVVSKVMDSEASIGYDALRNEYVNMIERGIIDPTKVVRTSLTDAAGVASLLTTA
ECVVCEIPKEEKADGGMGGMGGMGGMGGMGGMGGMM
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtctaccaagtcttctgagaacagcagctcttcgccagatcgctcctcaagca
tacagaaattatgctaaagatgttcgatttggagctgatgtacgagccttaatgttgcag
ggagtagatgttcttgctgatgcagttgctgtaaccatgggtcccaagggacgtaatgtt
attctagaacaatcatggggctcacctaaaatcaccaaggatggtgtaactgtagcaaag
ggtatcgaactgaaagacaaattccaaaacattggggccaagttagttcaagacgtagca
aataatacaaatgaatctgctggtgacggaacaactgctgcaacagtcttggctcgctcc
attgccaaggaaggatttgaaaagatcacaaagggtgctaatcctgttgaagttcgtcgt
ggtgtcatgcttgctgttgattctgttattgcaaacttgaaagccatgtccaagcaggtt
actactccagaagaaattgctcaggttgctaccatttctgctaatggtgatgaatcagtt
ggtaaactgatttctcaagcaatgaacaaagttggacgagagggagtcattactgtcaaa
gatggaaaaacgttgattgatgaacttgaagtcattgaaggcatgaaattcgaccgtggc
tacatttcaccttactttattaacacagcaaaaggcgctaaagtagaatatcaagatgcg
ttggtcttgttgagtgagaagaagatttcttccattcaatccatcattcctgctttggaa
ctcgccaatcaacaccgcaaacccctagtcattattgcggaagatatcgatggcgaagct
cttagcactctcgttgttaacagactgaagattggactccaggtagttgcagttaaagcc
ccaggatttggtgacaaccgcaaaaatacgcttcacgatatggccaatgctacaggtggc
ttggtctttggtgatgaagcaaatctcgtcaagctcgaagatattcagctgcacgacttt
ggtcaggttggagaagtggtggttactaaagacgacactctgttgttgagaggtaaaggc
cgcaaagaagacatcgcccagcgtgttacccaaatcaaggatcaaattgccgaaacaaca
tcagaatacgaaaaagagaagctgcaggagaggttagctaaactcgcctctggagttgct
gtccttaagattggtggatcaagcgaagttgaagtgaacgagaaaaaggatcgtgtcaac
gatgcactctgcgctacccgagctgccgtcgaggagggtatcgttcctggtggcggaact
gctctacttcgctgtattccttctttggacaagctgtcctatgcaaatgaagatcaaaaa
gttggcatcgacattattcgtcgcgctttgaggatgccttgcatgactattgccaaaaac
gctggagttgatgcttccgtcgtcgtctctaaagttatggactctgaagcttccattggt
tacgacgccctccgaaatgagtacgtcaacatgattgaacgcggtattattgaccctact
aaagttgtccgaacatctcttactgatgccgctggagttgcatccctcctcacaacagca
gaatgtgttgtttgtgaaatccccaaagaagagaaggccgatggcggcatgggaggaatg
ggcggtatgggaggcatgggtggaatgggaggtatgggcggaatgatgtaa
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