KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_301074
Entry
DAPPUDRAFT_301074 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DAPPUDRAFT_301074
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpx03019]
    DAPPUDRAFT_301074
   03110 Chaperones and folding catalysts [BR:dpx03110]
    DAPPUDRAFT_301074
   03029 Mitochondrial biogenesis [BR:dpx03029]
    DAPPUDRAFT_301074
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dpx04147]
    DAPPUDRAFT_301074
Enzymes [BR:dpx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     DAPPUDRAFT_301074
Messenger RNA biogenesis [BR:dpx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     DAPPUDRAFT_301074
Chaperones and folding catalysts [BR:dpx03110]
 Heat shock proteins
  HSP60 / Chaperonin
   DAPPUDRAFT_301074
Mitochondrial biogenesis [BR:dpx03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    DAPPUDRAFT_301074
Exosome [BR:dpx04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   DAPPUDRAFT_301074
  Exosomal proteins of other body fluids (saliva and urine)
   DAPPUDRAFT_301074
  Exosomal proteins of breast cancer cells
   DAPPUDRAFT_301074
  Exosomal proteins of colorectal cancer cells
   DAPPUDRAFT_301074
  Exosomal proteins of bladder cancer cells
   DAPPUDRAFT_301074
SSDB
Motif
Pfam: Cpn60_TCP1 DUF6956
Other DBs
NCBI-ProteinID: EFX84424
JGI: Dappu1_301074
UniProt: E9G788
LinkDB
Position
Unknown
AA seq 576 aa
MYRLPSLLRTAALRQIAPQAYRNYAKDVRFGADVRALMLQGVDVLADAVAVTMGPKGRNV
ILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNESAGDGTTAATVLARS
IAKEGFEKITKGANPVEVRRGVMLAVDSVIANLKAMSKQVTTPEEIAQVATISANGDESV
GKLISQAMNKVGREGVITVKDGKTLIDELEVIEGMKFDRGYISPYFINTAKGAKVEYQDA
LVLLSEKKISSIQSIIPALELANQHRKPLVIIAEDIDGEALSTLVVNRLKIGLQVVAVKA
PGFGDNRKNTLHDMANATGGLVFGDEANLVKLEDIQLHDFGQVGEVVVTKDDTLLLRGKG
RKEDIAQRVTQIKDQIAETTSEYEKEKLQERLAKLASGVAVLKIGGSSEVEVNEKKDRVN
DALCATRAAVEEGIVPGGGTALLRCIPSLDKLSYANEDQKVGIDIIRRALRMPCMTIAKN
AGVDASVVVSKVMDSEASIGYDALRNEYVNMIERGIIDPTKVVRTSLTDAAGVASLLTTA
ECVVCEIPKEEKADGGMGGMGGMGGMGGMGGMGGMM
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgtatcgtctaccaagtcttctgagaacagcagctcttcgccagatcgctcctcaagca
tacagaaattatgctaaagatgttcgatttggagctgatgtacgagccttaatgttgcag
ggagtagatgttcttgctgatgcagttgctgtaaccatgggtcccaagggacgtaatgtt
attctagaacaatcatggggctcacctaaaatcaccaaggatggtgtaactgtagcaaag
ggtatcgaactgaaagacaaattccaaaacattggggccaagttagttcaagacgtagca
aataatacaaatgaatctgctggtgacggaacaactgctgcaacagtcttggctcgctcc
attgccaaggaaggatttgaaaagatcacaaagggtgctaatcctgttgaagttcgtcgt
ggtgtcatgcttgctgttgattctgttattgcaaacttgaaagccatgtccaagcaggtt
actactccagaagaaattgctcaggttgctaccatttctgctaatggtgatgaatcagtt
ggtaaactgatttctcaagcaatgaacaaagttggacgagagggagtcattactgtcaaa
gatggaaaaacgttgattgatgaacttgaagtcattgaaggcatgaaattcgaccgtggc
tacatttcaccttactttattaacacagcaaaaggcgctaaagtagaatatcaagatgcg
ttggtcttgttgagtgagaagaagatttcttccattcaatccatcattcctgctttggaa
ctcgccaatcaacaccgcaaacccctagtcattattgcggaagatatcgatggcgaagct
cttagcactctcgttgttaacagactgaagattggactccaggtagttgcagttaaagcc
ccaggatttggtgacaaccgcaaaaatacgcttcacgatatggccaatgctacaggtggc
ttggtctttggtgatgaagcaaatctcgtcaagctcgaagatattcagctgcacgacttt
ggtcaggttggagaagtggtggttactaaagacgacactctgttgttgagaggtaaaggc
cgcaaagaagacatcgcccagcgtgttacccaaatcaaggatcaaattgccgaaacaaca
tcagaatacgaaaaagagaagctgcaggagaggttagctaaactcgcctctggagttgct
gtccttaagattggtggatcaagcgaagttgaagtgaacgagaaaaaggatcgtgtcaac
gatgcactctgcgctacccgagctgccgtcgaggagggtatcgttcctggtggcggaact
gctctacttcgctgtattccttctttggacaagctgtcctatgcaaatgaagatcaaaaa
gttggcatcgacattattcgtcgcgctttgaggatgccttgcatgactattgccaaaaac
gctggagttgatgcttccgtcgtcgtctctaaagttatggactctgaagcttccattggt
tacgacgccctccgaaatgagtacgtcaacatgattgaacgcggtattattgaccctact
aaagttgtccgaacatctcttactgatgccgctggagttgcatccctcctcacaacagca
gaatgtgttgtttgtgaaatccccaaagaagagaaggccgatggcggcatgggaggaatg
ggcggtatgggaggcatgggtggaatgggaggtatgggcggaatgatgtaa

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