Daphnia pulex (common water flea): DAPPUDRAFT_301376
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Entry
DAPPUDRAFT_301376 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dpx04040
]
DAPPUDRAFT_301376
Ion channels [BR:
dpx04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
DAPPUDRAFT_301376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_4
Ank_3
Cupin_NOL9
PKD_channel
Motif
Other DBs
NCBI-ProteinID:
EFX84229
JGI:
Dappu1_301376
UniProt:
E9G8Q1
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MERRNSKSDRSAKLLQSIQQEEIETFTGILSTATPDEINKVHGFPHDITCLQLAVQKGLL
AFVELLLDAGAEVNDFNTKRKLSSIHLAMKNNRPESLELLLRFGANVNQREGEGRTPLHI
LIGQWNKSGFEEFRWSYFDLLLSQPAIDINIQDNGEATPLELAVHKNLNQVVKKLFQAGA
VVNQHVRRAMEEKMPDLLAEYPEDERAANNNPDEINSDYLESEIWKALRNSNQERFQSLL
DTVQAGGVGTSVNLSTSTSDHNPTLLQYACKWQMPWAVSSLLAARVDPNQTSNMTSTPAL
MEAVLRVSGYIYSDGNVEIVRMLVYHPHILLDAVDHVHTGQTALHKIAQKLHDANSADEK
ARYVQCLHILVSSSSIQSQSRDPGSSTTFSSVNVNAQDAFGNTALHYAALSGVEEAVLQL
LSSGANLGIKNHLGETAVKRIMPSTLETFLDSCIRSKDGEDVSSQNFSITFDYSLLAPPR
PIPHPPQQLQPSETGITFSNHNDAVESISLHNSQDEEEKIFPECEALWHLSTSTKHQYLL
KHPLVTSFLMLKWHNISKFYYMNLLVYALTMLVLSTYILLLHSGYEPESLRIPLAILWYV
LGFFITILLVREFFQLGIAPLRYLFSPENYVELVMMGCTVAVLAHWDDPDPWRHVSAIAI
LLAWTEGLLLLGRHPQLSIFVTMFTTVSLTFLRLLLWYSVLLIGFGLSFFIVFGGENKAE
DGKEAKESAFTNIPVSLLKVVAMMSGELEYGDLPFDASPFVSRFIFLAFLFLITIVLLNL
LNGMAVSDTQSIQSKAETIGYVSRVELISYLESMLLGDPFHFLVDWPPFAFIRRHCPSFS
PLSSLMRGKSLRRFIRAESAVLFYRCLPNKTFTVYPRRNNINQISPINNPNEQMRTFRLD
EDIIQNACQRVQENKQQRSLHESNAQILSEVERLHSALLLLQNQQSKLFQMLQNGSQQS
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggagcgacgaaacagcaaatcggatcggtcggccaagttacttcaatccatccagcaa
gaagaaatcgagacattcactggcatcttatcgacagccacgccggatgagatcaacaaa
gtccatggattcccgcacgatattacgtgtcttcagctagccgttcaaaagggactgctg
gcttttgtggagcttttattggacgccggagcggaggtgaatgatttcaacaccaagagg
aaactctcgtccatccatctggcgatgaagaacaaccgaccagaaagcctcgagcttctt
ttaagattcggagctaatgtcaatcagcgtgaaggtgaaggtcgtacacctttgcacatc
ctcataggccaatggaataaaagcggattcgaagaattccggtggtcgtatttcgatttg
ctgctatctcaaccggcaattgacatcaacattcaagataatggcgaagccactccgctg
gaacttgccgttcacaagaacttgaaccaagtggttaagaaattatttcaggccggcgcc
gtcgttaatcaacatgtccgccgagcgatggaagagaaaatgccagatttactggccgag
tatcccgaagatgaacgtgcagctaataataatcccgacgaaatcaacagcgactatttg
gaatctgaaatttggaaagctctgagaaatagtaaccaggagcgttttcaatctctttta
gacacggttcaagcaggtggcgtgggcacgagtgtcaacttgagcacgtcaacatcagat
cacaatccaactcttcttcaatatgcatgtaaatggcaaatgccttgggcagtttcttct
ctactggcagcgagagttgatccaaatcaaaccagcaacatgacttccactccagcttta
atggaagcagtcctcagagttagtggctatatttactctgacggtaatgttgaaattgtc
aggatgttggtgtatcatccccacattcttctagacgccgtcgatcacgttcataccggt
cagaccgctctgcataaaatcgctcaaaaactgcacgacgccaacagcgcagatgaaaaa
gctcgttacgttcagtgcctccatattctggtctcgtcttccagtatccagtctcagtct
cgtgacccaggcagcagcactactttctcatcggtcaacgtcaatgcacaagacgctttt
ggcaacacggcactccattatgccgccctctctggagtggaggaggctgtactgcaatta
ctcagcagtggggccaacctgggcattaaaaaccatttgggagagacggccgtcaagaga
ataatgccgtcaacgttggaaacatttctcgattcgtgtattcgatcgaaagacggagaa
gatgtgtcatcacagaactttagcatcacttttgattattcgctgctggctcctccaagg
ccgatccctcatccacctcaacagctgcaaccgtcagaaacgggtattacattttccaac
cacaacgatgcggttgaatcgatcagccttcacaattcacaagatgaagaagaaaagatt
ttcccagaatgtgaagctctttggcatttgagtacttcaaccaaacaccaatatctactt
aaacatccattagtgacgagttttctcatgctcaagtggcacaatatcagcaaattctat
tacatgaacctccttgtttacgcactgactatgctcgtcctatccacctacattttattg
ctccattccggctacgaaccggaatcccttcggatcccgctggcaattttgtggtacgtg
ctcggatttttcatcacgatccttctagttcgagagtttttccagctaggcatcgctcca
cttcgctatctcttcagtccggaaaactacgttgaattggttatgatgggatgcaccgtt
gcggtgctggcccattgggacgatcctgatccatggcgccacgtctccgctatcgccata
ttgttggcatggactgaaggattacttctactcggtcgccacccacagctctccattttc
gtcaccatgttcaccaccgtatcgctaactttcctgcgtttgctcctctggtattccgtc
ctattgatcggcttcggtttgagcttcttcatcgtctttggtggcgagaataaagcggaa
gatggcaaagaagctaaagaatcagcttttaccaatattcccgtgtcactgctgaaagtg
gttgccatgatgtcgggtgaattggaatatggcgatttaccttttgatgccagtccattc
gtcagtcgattcatctttttggctttcctctttctcattacgattgtcctgttgaatctg
cttaacggtatggccgtatcagatacccaatctatacagagcaaggctgagactatcggt
tacgtctcaagagtggaattaatttcctatctggaatcgatgttgttgggcgatcctttt
catttcctggtcgactggccgccttttgcctttatccgtcgacattgtccgtcctttagt
ccattgtccagtctcatgcgcggtaaatcgctgcgtcgcttcataagagctgaaagtgca
gtcctattctatcgatgtcttcctaataagacattcaccgtctatccgcgccgcaacaac
attaatcagatctcccccatcaataatcctaacgagcaaatgagaacattccgattggac
gaggatattatacaaaatgcctgtcagcgagtgcaagagaacaaacagcagcgttccttg
cacgaaagcaacgcgcaaattctatctgaagtagaaagattgcactcggctctacttctc
ttgcaaaatcagcaatcgaaactcttccaaatgcttcagaatggcagtcaacagtcgtga
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